Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq121 111 1e-19 seq165 96.9 3e-15 seq99 93.3 4e-14 seq110 82.4 7e-11 >seq121 Length=2448542 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| |||||||| | ||||| ||| || || || || ||| Sbjct 310737 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCA 310678 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || ||||| |||||||| ||||||||||| ||| || || ||| Sbjct 310677 GCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTA 310618 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||||| || ||||||| ||| | ||| ||||| || ||||| Sbjct 310617 ACGTTGT-CGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGT 310559 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 310558 CTTCACGAAAATCTGCAT 310541 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | || | ||| | ||| ||||| || || ||||||||||| Sbjct 310995 CCACCACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAA 310936 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || || | || | |||||||||||||| || Sbjct 310935 AGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGA 310876 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || ||| ||| | | |||| ||| || | | ||| ||| Sbjct 310875 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACT 310816 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||||||||| || || || ||||| |||||||| Sbjct 310815 TCAAGCGTAATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||| ||| | ||| ||||| || || |||||||| ||| Sbjct 310539 CCACCACGAAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 310480 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| | |||||||| || || || ||||| Sbjct 310479 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 310420 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| ||| ||| | | |||| |||||| | ||| || Sbjct 310419 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACC 310360 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| | || |||||||| || || || || Sbjct 310359 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 310325 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || |||||||||||||| | || || || || ||||| |||||| Sbjct 310199 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCA 310140 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | |||| ||||| || ||||| || ||||||||||||||| ||| ||| |||| Sbjct 310139 GCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 310080 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | | |||| ||| || | |||||| |||| ||| | || |||||||| Sbjct 310079 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 310027 >seq165 Length=1469810 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 93444 GTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 93503 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| ||||| || ||||| || ||||||||||||||| ||| || |||| Sbjct 93504 GCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 93563 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||||| |||||| |||| ||| | || ||||| || || || Sbjct 93564 ACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTC 93623 Query 127097 TTTACAAAAATCTGCATG 127114 || || || || |||||| Sbjct 93624 TTGACGAAGATTTGCATG 93641 >seq99 Length=2343619 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 47343 GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAA 47402 ||||| || | || |||||| || ||| |||||| || | ||||| || ||| Sbjct 2127060 GACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCCCTGT 2127119 Query 47403 TCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGC 47462 | | | || ||||||||| | | |||| ||||||| || || ||||||||| | Sbjct 2127120 GCCCTGCTCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACAGG 2127179 Query 47463 CTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATG 47522 |||||||| || || ||||| ||| || || || ||||| || ||| Sbjct 2127180 CTGCTCGTCGCCCTCGGAAATGAGAAGATCTACAGGTCCACCAACCCCTTCGACTTCATG 2127239 Query 47523 AACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 | ||||| || |||| |||||||||||||| ||||||||||| || || || || Sbjct 2127240 GAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 2127295 >seq110 Length=3171699 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || |||||||||||||| | ||||| ||| || ||||| ||||| ||| | || Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 54529 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | ||||| ||||||||||| || |||||||||||| || || ||| | | ||| Sbjct 54528 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 54469 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | ||||||| |||||| || | ||| | || || || || || || || || ||| Sbjct 54468 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAA 54409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499753898240