Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq165 150 2e-31
seq121 125 8e-24
seq110 84.2 2e-11
>seq165
Length=1469810
Score = 150 bits (166), Expect = 2e-31
Identities = 153/198 (77%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| |||| ||||||||||||||||||||
Sbjct 93449 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 93508
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||| ||||||| || | || |||||||||| |||||| ||||| |
Sbjct 93509 GATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 93568
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || || || || | |||||||| |||||||| || || || ||
Sbjct 93569 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 93628
Query 46582 AAAGATTTGCAT-TTTGC 46598
||||||||||| |||||
Sbjct 93629 GAAGATTTGCATGTTTGC 93646
>seq121
Length=2448542
Score = 125 bits (138), Expect = 8e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | || |||||| ||||||||||||||||| || ||||| | || |||
Sbjct 310521 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCG 310462
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||||||||| ||||| || || ||||| | || | | |||||||||| |
Sbjct 310461 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 310402
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||| | | | | |||||| ||| || || || | |||||||| |||
Sbjct 310401 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTG 310342
Query 46565 CCCGTCAGCGTTTTAAC 46581
|| || || || || ||
Sbjct 310341 CCGGTAAGGGTCTTGAC 310325
Score = 122 bits (134), Expect = 1e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||||||||| || || |||||||| |||| || |||||||||||||| ||
Sbjct 310960 CTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAA 310901
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||| |||| || | | |||||||||| |||||| ||| | |
Sbjct 310900 AATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATT 310841
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || ||| || || || || | ||| ||||||||||| || || || || ||
Sbjct 310840 GTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGTAAGGGTCTTGAC 310781
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 310780 AAAGATCTGCAT 310769
>seq110
Length=3171699
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| || |||||||| || || || ||||| | || ||||||||||| |||||||| |
Sbjct 54590 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 54531
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
| | ||||| || |||| || | | |||||||||| ||||| ||| | |
Sbjct 54530 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 54471
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| || || || || | |||||||| || ||||| || || || || |
Sbjct 54470 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGA 54411
Query 46584 A 46584
|
Sbjct 54410 A 54410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237156475520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |