Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq99 178 1e-39
seq165 147 2e-30
seq121 100 3e-16
>seq99
Length=2343619
Score = 178 bits (196), Expect = 1e-39
Identities = 332/481 (69%), Gaps = 10/481 (2%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | || ||| | ||| || || |||||||||
Sbjct 2127280 TTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTG 2127221
Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | ||||| ||| | |||| || ||||||||||||||||||| ||||||
Sbjct 2127220 GTGGACCTGTAGATCTTCTCATTTCCGA---GGGCGACGAGCAGCCTGTCGGCGACGAAC 2127164
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTT 132799
|| ||||| ||| |||| | ||||| | | | || ||||| |||| || || || |
Sbjct 2127163 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGG-GCACAGGGGAGGGCCT 2127106
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
| ||||| || |||||||| ||| || || || | ||| ||| | | | || |
Sbjct 2127105 CAGTGAGGAACTCCTGCTCGATCTTGACGGCATCAGTAATGATGTCCTTGATGAGCTGCT 2127046
Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919
| || || ||| | || ||||| | ||| || |||||| || | ||||
Sbjct 2127045 TGTCGGGGCGGTGCTTGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTGTGGAGACCCT 2126986
Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979
|||| | ||| ||||| || ||| ||| || | || ||||| |||||||| || ||||
Sbjct 2126985 CGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATAAGGCCGCGCTTCTTGA 2126926
Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039
|||| || |||| |||||| || ||||||| ||||||||||| ||||| || |
Sbjct 2126925 GCCAGAAAATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAA 2126866
Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099
| ||||||| |||| ||||| || | ||| |||||||| || ||||| |||||||
Sbjct 2126865 CGAGGCGCTGAGCGAAGGTGGCCTCGCGGTCGGCAATCCAGCGAAGAGCCCAGTCGGCCT 2126806
Query 133100 T 133100
|
Sbjct 2126805 T 2126805
Score = 134 bits (148), Expect = 1e-26
Identities = 198/277 (71%), Gaps = 5/277 (2%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| || |||||| || || | |||||||| | ||||||||| ||| || ||
Sbjct 2126663 GTAGGTATCAATGAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 2126604
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285
||||| ||||| || ||||| | ||| || || | || ||| ||||| || || |
Sbjct 2126603 ACCGTAGAAGCAGCGGGCCTCAGGGATCTGGACCTCA-GCGCTGAATCGCTCAACGAGGT 2126545
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| ||||||||||| || ||| ||||||||| ||||| || | |||| ||||||||
Sbjct 2126544 TCTCGTTGACGATACCATCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGATGAAATACT 2126485
Query 133346 GCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402
||||| || || | | | ||||||| | |||||||| || || | ||| |
Sbjct 2126484 TCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCTT 2126425
Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| | ||||| || || |||||||| || ||||||||
Sbjct 2126424 CGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 2126388
>seq165
Length=1469810
Score = 147 bits (162), Expect = 2e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| |||||||| ||||| || || || |||||||| ||||||||| |||| |||||| |
Sbjct 93644 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTC 93585
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| | |||| | | | | || || |||| ||||| ||||| || ||| ||||
Sbjct 93584 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 93525
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||||||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||
Sbjct 93524 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 93465
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| |||| || || | || || ||| | | |||||
Sbjct 93464 CAACATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 93414
>seq121
Length=2448542
Score = 100 bits (110), Expect = 3e-16
Identities = 168/243 (69%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||||||||| || | || || ||| | ||
Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || || || | ||||| |||||||||||| |||| ||
Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||||| || ||||| ||||| || |||| ||||| || || |||||
Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGCCGCACGCAT 38483
||||| ||||| | ||||| ||| | || || || | | || |||| | ||| ||
Sbjct 310949 ATCCAGAAGGAGTCCACGCTCCATCTCGTCCTCCGCCTTCGTGGTGGCCACTAAACGGAT 311008
Query 38484 GAA 38486
|||
Sbjct 311009 GAA 311011
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| ||||| ||||||||| |||| |||||| || | || | | | | | | ||
Sbjct 310025 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 310084
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||| ||||| || ||| ||||||||||||| || |||| ||| || |
Sbjct 310085 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 310144
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| ||||| || |||| || ||||| || ||||| || || |||||| | || || |
Sbjct 310145 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 310204
Query 38446 A 38446
|
Sbjct 310205 A 310205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171699619840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |