Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq99 178 1e-39 seq165 147 2e-30 seq121 100 3e-16 >seq99 Length=2343619 Score = 178 bits (196), Expect = 1e-39 Identities = 332/481 (69%), Gaps = 10/481 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | || ||| | ||| || || ||||||||| Sbjct 2127280 TTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTG 2127221 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||| ||| | |||| || ||||||||||||||||||| |||||| Sbjct 2127220 GTGGACCTGTAGATCTTCTCATTTCCGA---GGGCGACGAGCAGCCTGTCGGCGACGAAC 2127164 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTT 132799 || ||||| ||| |||| | ||||| | | | || ||||| |||| || || || | Sbjct 2127163 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGG-GCACAGGGGAGGGCCT 2127106 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | ||||| || |||||||| ||| || || || | ||| ||| | | | || | Sbjct 2127105 CAGTGAGGAACTCCTGCTCGATCTTGACGGCATCAGTAATGATGTCCTTGATGAGCTGCT 2127046 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | || || ||| | || ||||| | ||| || |||||| || | |||| Sbjct 2127045 TGTCGGGGCGGTGCTTGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTGTGGAGACCCT 2126986 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | ||| ||||| || ||| ||| || | || ||||| |||||||| || |||| Sbjct 2126985 CGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATAAGGCCGCGCTTCTTGA 2126926 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| |||||| || ||||||| ||||||||||| ||||| || | Sbjct 2126925 GCCAGAAAATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAA 2126866 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 | ||||||| |||| ||||| || | ||| |||||||| || ||||| ||||||| Sbjct 2126865 CGAGGCGCTGAGCGAAGGTGGCCTCGCGGTCGGCAATCCAGCGAAGAGCCCAGTCGGCCT 2126806 Query 133100 T 133100 | Sbjct 2126805 T 2126805 Score = 134 bits (148), Expect = 1e-26 Identities = 198/277 (71%), Gaps = 5/277 (2%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| || |||||| || || | |||||||| | ||||||||| ||| || || Sbjct 2126663 GTAGGTATCAATGAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 2126604 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 ||||| ||||| || ||||| | ||| || || | || ||| ||||| || || | Sbjct 2126603 ACCGTAGAAGCAGCGGGCCTCAGGGATCTGGACCTCA-GCGCTGAATCGCTCAACGAGGT 2126545 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | ||||||||||| || ||| ||||||||| ||||| || | |||| |||||||| Sbjct 2126544 TCTCGTTGACGATACCATCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGATGAAATACT 2126485 Query 133346 GCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 ||||| || || | | | ||||||| | |||||||| || || | ||| | Sbjct 2126484 TCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCTT 2126425 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||| || || |||||||| || |||||||| Sbjct 2126424 CGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 2126388 >seq165 Length=1469810 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| || || || |||||||| ||||||||| |||| |||||| | Sbjct 93644 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTC 93585 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | | | | || || |||| ||||| ||||| || ||| |||| Sbjct 93584 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 93525 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 93524 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 93465 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| |||| || || | || || ||| | | ||||| Sbjct 93464 CAACATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 93414 >seq121 Length=2448542 Score = 100 bits (110), Expect = 3e-16 Identities = 168/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||||||||| || | || || ||| | || Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || || | ||||| |||||||||||| |||| || Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || ||||| ||||| || |||| ||||| || || ||||| Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGCCGCACGCAT 38483 ||||| ||||| | ||||| ||| | || || || | | || |||| | ||| || Sbjct 310949 ATCCAGAAGGAGTCCACGCTCCATCTCGTCCTCCGCCTTCGTGGTGGCCACTAAACGGAT 311008 Query 38484 GAA 38486 ||| Sbjct 311009 GAA 311011 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| ||||||||| |||| |||||| || | || | | | | | | || Sbjct 310025 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 310084 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| || ||| ||||||||||||| || |||| ||| || | Sbjct 310085 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 310144 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || |||| || ||||| || ||||| || || |||||| | || || | Sbjct 310145 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 310204 Query 38446 A 38446 | Sbjct 310205 A 310205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171699619840