Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq121 174 3e-38
seq165 120 7e-22
seq110 120 7e-22
>seq121
Length=2448542
Score = 174 bits (192), Expect = 3e-38
Identities = 164/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| |||||||| || ||||| |||||||| | ||| || | ||||||||
Sbjct 310749 ACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCC 310690
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| |||||||| || |||||||| ||||| ||||| ||||| ||||| || || || |||
Sbjct 310689 AGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGA 310630
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| || ||||||||||| ||| ||||| ||||||| ||||||
Sbjct 310629 ATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTG 310570
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||| || ||||| | |||||
Sbjct 310569 CCAGTAAGAGTCTTCACGAAAATCTGCAT 310541
Score = 129 bits (142), Expect = 1e-24
Identities = 140/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||||||||| ||||| || || |||||||||||||| | ||| |||| || || ||
Sbjct 310212 AACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTC 310153
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || ||||| || || || |||||||| || || ||||| || ||||| ||
Sbjct 310152 AAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTG 310093
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || |||||| || || ||||| || || || || || ||||| | |||||
Sbjct 310092 GATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTT 310033
Query 195111 TCCTGT 195116
|| ||
Sbjct 310032 GCCGGT 310027
Score = 125 bits (138), Expect = 2e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || || |||||||| |||| || || | ||||| |||
Sbjct 310521 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCG 310462
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || | |||||||||||| |||||||| || || ||||| ||
Sbjct 310461 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 310402
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || |||||||| || || || || ||||| | |||||
Sbjct 310401 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTG 310342
Query 195112 CCTGTCAAAGTTTTTACGA 195130
|| || | || || ||||
Sbjct 310341 CCGGTAAGGGTCTTGACGA 310323
Score = 111 bits (122), Expect = 3e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || || ||||||||||| | |||||| | || || ||
Sbjct 310977 ACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCA 310918
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || || || || || || || || || ||||| || || ||||| |||
Sbjct 310917 AGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGA 310858
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || ||||| || ||| || |||||||| |||| || ||
Sbjct 310857 ATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTG 310798
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || || || | |||||
Sbjct 310797 CCGGTAAGGGTCTTGACAAAGATCTGCAT 310769
>seq165
Length=1469810
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| || | || || | || || |||
Sbjct 93432 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCG 93491
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || |||||||| || || ||||| || ||||| ||
Sbjct 93492 AGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 93551
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || || |||||||| || || || ||||| | |||||
Sbjct 93552 ATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 93611
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | ||||||
Sbjct 93612 CCCGTTAGGGTCTTGACGAAGATTTGCAT 93640
>seq110
Length=3171699
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| |||||||||||||| | ||| || | ||||| ||||||||||| || ||||| |||
Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 54529
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || ||||| || ||||| || || || ||||| ||||| || ||| || || ||
Sbjct 54528 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 54469
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| |||||||| || || |||||||| | ||||| || || | || || |||||
Sbjct 54468 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 54410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479098118992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |