Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq121 100 2e-16 seq165 89.7 3e-13 >seq121 Length=2448542 Score = 100 bits (110), Expect = 2e-16 Identities = 149/209 (71%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||||||||| || || |||||| | || |||| ||||| || Sbjct 310744 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGTTG 310685 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || ||||| || || ||||||||||| | || | |||||||| || |||||| Sbjct 310684 CTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTT 310625 Query 34898 CTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTC 34953 || || | | ||||| | ||| | ||||| |||| ||| || || || | Sbjct 310624 GGACTTAAC----GTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGC 310569 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || ||||||||||| || ||||||||| Sbjct 310568 CAGTAAGAGTCTTCACGAAAATCTGCATA 310540 Score = 86.0 bits (94), Expect = 4e-12 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || || || ||||| | || | || || ||||| || |||||||| Sbjct 310959 TCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAA 310900 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| ||||||| || || || Sbjct 310899 ATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCAC--AT 310842 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | |||||| || | || |||||||| || || || ||||| Sbjct 310841 --TGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGTAAGGGTCTT 310784 Query 34967 CACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 310783 GACAAAGATCTGCATA 310768 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| ||| ||| |||||||| || || || |||||| |||| | || || Sbjct 310212 AACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTC 310153 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| || || || || || || ||||| | || | ||||||||||| Sbjct 310152 AAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTG 310093 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| ||||| || | ||||| ||| || ||| || |||| ||| |||| Sbjct 310092 GATCTTCGACTTGAC--AT--TGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGG 310037 Query 34948 TTTTTCCCGTGA 34959 | || || |||| Sbjct 310036 TCTTGCCGGTGA 310025 >seq165 Length=1469810 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || | || || ||||| || ||||| || Sbjct 93450 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 93509 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||| ||||| Sbjct 93510 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 93569 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || |||| ||| ||||| || ||||| || ||||| || Sbjct 93570 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACG 93629 Query 34971 AAGATCTGCATATT 34984 ||||| ||||| || Sbjct 93630 AAGATTTGCATGTT 93643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632903660928