Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq11 104 3e-17 >seq11 Length=1169955 Score = 104 bits (114), Expect = 3e-17 Identities = 267/407 (66%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 48156 CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATA 48215 || || ||||| || || ||||||| | ||| || | | |||| |||| |||| Sbjct 977400 CCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATG 977459 Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCA 48275 || | ||| || ||||| || || | || | ||||| | || | ||||| ||||| Sbjct 977460 AAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCTCGAACCTCTTCTTTGCCG 977519 Query 48276 CTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATT 48335 ||| | ||| || | || || | || ||| || ||||||||||| | || || Sbjct 977520 TGGTTCTTGCGAAGGTCCAAGAACTCGAATACATCTGCGTGCCATGGTTCAAGGTAGATG 977579 Query 48336 GCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAA 48395 || | | || || || |||||||| ||||| || | || ||||| || ||||| | Sbjct 977580 GCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGTACCTGGCGGTGTTGTTGAAG 977639 Query 48396 ACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCA 48455 || | | ||| || | ||| || || || | ||||| || |||| |||||| || Sbjct 977640 ACACGAAGCATGGGAATAATGCCGTTGGACGTTCCATTTGTCCCCGCAATATATGAGCCT 977699 Query 48456 CTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCA 48515 | || | || | || | || || ||||| |||||||| || || | || Sbjct 977700 GTGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCG 977759 Query 48516 CACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCAT 48562 || || | || ||||||||||| || ||||||||||| |||| Sbjct 977760 CATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCATCCTTCAT 977806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107563360640