Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq121 113 4e-19
>seq121
Length=2448542
Score = 113 bits (124), Expect = 4e-19
Identities = 159/221 (72%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||||||||| || || |||||||| || || ||| |||||||||| || || |
Sbjct 310759 GAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCG 310700
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
|||||| ||||| || || ||||| ||||| | |||||| || ||||| || || ||
Sbjct 310699 GCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTC 310640
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434
||||| ||||| || || || || || || || | ||| | | |||||| |
Sbjct 310639 CTTATCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCCGA-TGATTCAACTTCGAGGG 310581
Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||| || || ||||||||||| || |||||||| ||||||
Sbjct 310580 TAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCATA 310540
Score = 86.0 bits (94), Expect = 5e-11
Identities = 155/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|| ||||| || ||||| || || ||| | ||| ||||||||||||| ||||| |
Sbjct 310986 AGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGG--ATATTGTAATCAGAAAGAGTGC 310929
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
|| ||||| || || ||||||||||| || | |||||||| || |||||||| |
Sbjct 310928 GACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCT 310869
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433
| || || ||||| || || || || || ||||| | || | | ||| ||
Sbjct 310868 CCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATC-GGAAGACTCAACTTCAAGC 310810
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|||| ||||| || ||||| || || || || || ||||||
Sbjct 310809 GTAATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCATA 310768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029286692326240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |