Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq121 113 4e-19 >seq121 Length=2448542 Score = 113 bits (124), Expect = 4e-19 Identities = 159/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || || |||||||| || || ||| |||||||||| || || | Sbjct 310759 GAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCG 310700 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| ||||| || || ||||| ||||| | |||||| || ||||| || || || Sbjct 310699 GCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTC 310640 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||| ||||| || || || || || || || | ||| | | |||||| | Sbjct 310639 CTTATCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCCGA-TGATTCAACTTCGAGGG 310581 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| || || ||||||||||| || |||||||| |||||| Sbjct 310580 TAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCATA 310540 Score = 86.0 bits (94), Expect = 5e-11 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 || ||||| || ||||| || || ||| | ||| ||||||||||||| ||||| | Sbjct 310986 AGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGG--ATATTGTAATCAGAAAGAGTGC 310929 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 || ||||| || || ||||||||||| || | |||||||| || |||||||| | Sbjct 310928 GACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCT 310869 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433 | || || ||||| || || || || || ||||| | || | | ||| || Sbjct 310868 CCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATC-GGAAGACTCAACTTCAAGC 310810 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| ||||| || ||||| || || || || || |||||| Sbjct 310809 GTAATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCATA 310768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029286692326240