Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq99 129 1e-24 >seq99 Length=2343619 Score = 129 bits (142), Expect = 1e-24 Identities = 296/448 (66%), Gaps = 9/448 (2%) Strand=Plus/Plus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| ||||| || ||||| ||||| ||||||||| | || || ||| Sbjct 2126857 AGCGCCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCA 2126916 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 | |||||||||||| || || ||||| || || ||| ||||| ||||||||| Sbjct 2126917 TTTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCATCT 2126976 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | | |||||||||||||||| || || || ||||| || | | | |||| | | Sbjct 2126977 CCCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTC---CCACCTCAAGC 2127033 Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || |||| || | || | ||||| | || || || |||||||| || Sbjct 2127034 AC-CGCCCCGACAAGCAGCTCATCAAGGACATCATTACTGATGCCGTCAAGATCGAGCAG 2127092 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| | ||||||| Sbjct 2127093 GAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 2127152 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCT 26233 || |||||||||| || |||||| ||||| || ||| || ||| | | ||| Sbjct 2127153 CAGTACATTGAGTTCGTCGCCGACAGGCTGCTCGTCGCC--CTCGGAAATGAGAAGATCT 2127210 Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 |||| | | ||||| |||||||| ||||| ||||| || | | || |||||||||| Sbjct 2127211 ACAGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACT 2127270 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||| || ||| | || || ||||| || Sbjct 2127271 TCTTCGAGAAGCGTGTTGGTGACTACCA 2127298 Score = 114 bits (126), Expect = 2e-20 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| ||||||||||||||||| Sbjct 2126379 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTC 2126438 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| | ||| |||| || |||| || | |||||| || |||| || Sbjct 2126439 TCCAAGGATCTCCACGACTGGAACAACAAGCTCAATG--ATGACGAGAAGTATTTCATCT 2126496 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || | | || ||||| || ||||| |||||||| || |||||||| || ||| Sbjct 2126497 CGCACATTCTTGCCTTCTTCGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGTTGAGC 2126556 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||||| | || || ||| | |||||| || ||||||||||||||||| Sbjct 2126557 GATTCAGCGCTGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGAT 2126611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842756541440