Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq121 114 8e-20 seq110 104 2e-16 >seq121 Length=2448542 Score = 114 bits (126), Expect = 8e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || || ||||| || || || || || ||||||| || || Sbjct 310762 ACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGT 310703 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||| |||||||| |||||||| ||||||||||| || || ||||| || || Sbjct 310702 GCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCC 310643 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| || |||||||| || || || || || || | || | || ||| | Sbjct 310642 CTCCTTATCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTCAA-CTTCGA 310584 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || || |||||||| |||||||| || Sbjct 310583 GGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTG 310544 Score = 102 bits (112), Expect = 5e-16 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| ||||| ||||| ||||| || ||| || || ||| ||||||| || || Sbjct 310224 ACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGT 310165 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || | || ||||| ||||||||||| ||||| || || ||||| || || || || || Sbjct 310164 TCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCC 310105 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 |||||||| || ||||| |||||| || || ||||||| Sbjct 310104 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAG 310061 >seq110 Length=3171699 Score = 104 bits (114), Expect = 2e-16 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| ||||||| || || | | ||| || || |||||||| || ||||||||||| Sbjct 54583 AATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATAAGACG 54524 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 |||||||| ||||| ||||| |||||||| |||||||| || ||| || || || Sbjct 54523 CTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATCGT 54464 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAA 480764 || | | |||||||| || || ||||| ||||| ||||| |||||| Sbjct 54463 GTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAA 54409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268171650506048