Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq132 178 2e-38
seq44 132 6e-25
seq99 127 2e-23
seq11 114 2e-19
seq98 100 3e-15
>seq132
Length=2107841
Score = 178 bits (196), Expect = 2e-38
Identities = 263/373 (71%), Gaps = 0/373 (0%)
Strand=Plus/Plus
Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925
|| ||| |||||||| || || | | | || ||| || | |||||||| || ||
Sbjct 460152 GAAGGCAACATGCCCCACGTCATCATCTCTGGAATGCCAGGTATCGGCAAGACGACAAGT 460211
Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985
||| ||||| ||||| | | || | ||| | |||||||| || ||||||
Sbjct 460212 ATCCACTGTCTCGCGCGGCAATTACTCGGAGACGCCTATAAGGAGGCCGTACTAGAACTC 460271
Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045
||||| ||||| | ||| |||||||||||||||| |||||| | ||||
Sbjct 460272 AACGCCAGTGACGAAAGAGGCATCGACGTCGTGCGCAACCGAATCAAGGGCTTCGCCCAA 460331
Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105
|||| || ||| |||||||| ||||||||| | ||||||||||||| |||||| ||
Sbjct 460332 AAGAAAGTCACCCTCCCGCCCGGCCGCCACAAGCTCGTCATCCTCGACGAAGCCGACAGC 460391
Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165
| || |||| || || |||||||| || |||||||||| || |||||||||||
Sbjct 460392 ATGACTTCGGGCGCGCAACAGGCCCTCCGCCGAACCATGGAAATCTACTCCAACACGACG 460451
Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225
|| || ||| | ||||||||| || | | | |||||| |||| ||| ||||||
Sbjct 460452 CGATTCGCCTTCGCGTGCAACCAATCTAACAAGATTATCGAGCCCCTGCAATCCCGCTGC 460511
Query 1574226 GCCATTCTGCGCT 1574238
|| ||||| ||||
Sbjct 460512 GCTATTCTTCGCT 460524
>seq44
Length=1380919
Score = 132 bits (146), Expect = 6e-25
Identities = 268/395 (68%), Gaps = 12/395 (3%)
Strand=Plus/Minus
Query 18097 TTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATG 18156
|| || || || ||||| | |||||| |||||||||||| | || || |||||
Sbjct 965389 TTCGGTGAATCCCACGGCAAAGCCGTCGGGTGCATCATCGACAACCCACCCCCCGGCATG 965330
Query 18157 CCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCA 18216
| || |||| |||||||||| || || | | || ||||| || ||||| || |
Sbjct 965329 ACCCTCACCGAATCCGACATCCAACCCCAACTCAACCGCCGCCGCCCAGGCCAAAGCTCC 965270
Query 18217 CTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGC 18276
| ||||||| ||| |||| || ||||| | |||||| || ||||| || ||||
Sbjct 965269 ATCACCACGCCTCGCGACGAAAAGGACCGCGTAACCATCCAATCCGGCACCGAATTCGGC 965210
Query 18277 CTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGAC 18336
|| |||||| | ||| || ||||| | || ||| |||||||| ||| |||
Sbjct 965209 AAGACCCTCGGCACCCCCATCAGCCTCGTCGTCATGAACGAGGACCAGCGCCCCAAGGAC 965150
Query 18337 TATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATG 18390
|| | ||| | || || ||||| || || |||||||||| ||||||| |
Sbjct 965149 TACGGCAACAAGACCATGGACGTCTACCCGCGCCCTTCCCACGCCGACTTCACCTACCTC 965090
Query 18391 GCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCT---GCCCGCGAGACC 18447
| || |||||||||||||| | | |||| ||| || | | |||||||||||
Sbjct 965089 GAGAAATACGGCATCAAGGC--CAGC-AGCGGTGGCGGGAGGAGTAGCGCCCGCGAGACT 965033
Query 18448 CTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
| ||| || || |||||||| ||||| |||||
Sbjct 965032 ATTGCGCGTGTGGCGGCCGGCGCTGTCGCTGAGAA 964998
Score = 91.5 bits (100), Expect = 2e-12
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107
|||||| ||||||||| || || ||||| || ||||||||| | || ||||||||||
Sbjct 964761 ACAGCACCGGCGGCACCGTCACCTGCGTTATCCGAAACGTGCCGTCGGGTCTCGGCGAGC 964702
Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167
| ||| |||||| | |||||| | ||| || |||||| || ||||| ||| ||
Sbjct 964701 CCGCCTTCGACAAGCTTGAGGCCAAGATCGGTCATGCCATGATGAGCATCCCCGCCGTCA 964642
Query 19168 AGGGATTCGAGATTGGCAGCGGGTT 19192
||| ||||| || ||| ||| ||
Sbjct 964641 AGGCCTTCGAAATCGGCTCCGGCTT 964617
>seq99
Length=2343619
Score = 127 bits (140), Expect = 2e-23
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| |||| |||||
Sbjct 2127304 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATG 2127245
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | | ||||| ||| || |||||| | ||
Sbjct 2127244 TTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCTCATTTCCGAGGGCGACG 2127185
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||| | ||||||||| ||||| |||||||| ||||||| |||||||||||||
Sbjct 2127184 AGCAGCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGC 2127125
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923
|| || || || | ||| | | ||||| | |||||||| |||||| ||
Sbjct 2127124 AGGGCACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGCATC 2127072
>seq11
Length=1169955
Score = 114 bits (126), Expect = 2e-19
Identities = 261/390 (67%), Gaps = 17/390 (4%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||| ||||| | || |||| ||| ||||| || |||||||| | | ||||||||||
Sbjct 977610 TGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGAC 977669
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
|| || || ||||| | || | ||| | |||||| | || | | ||||
Sbjct 977670 GTTCCATTTGTCCCCGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGTTGAGGCCG 977729
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244
||||| |||||| || ||||| | ||||| ||| || | |||||| || || |||||
Sbjct 977730 ATGCCACCGGCCATTTTTGAGATCATTGCGCA-TGTCTTCAACGTGTCATAAATTCCCTC 977788
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| || |||||||||| ||||| ||||| || || || | || | |||||
Sbjct 977789 AATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGGGGGGTGCC 977848
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|||||| ||||| ||||| | || ||||| || | |||||| | ||| ||
Sbjct 977849 GGCGTTAAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGT 977908
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
| | ||| ||| | | ||||| || ||| ||| |||| ||||||
Sbjct 977909 CTCAATCACACGCTCAACGTCATCGCCC-------CAA----ATA----CCGACGGCGAC 977953
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGAC 1630454
||||| | ||||| ||| || ||||||||
Sbjct 977954 ACGCATAATCATGTGCTGAGGTCGCTCGAC 977983
>seq98
Length=1174881
Score = 100 bits (110), Expect = 3e-15
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| | ||||| || ||||||||||| || || || | || |||||| | || ||||||
Sbjct 877208 GCCTCGAACTATCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 877267
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||| ||||| ||||| |||||||| ||||| || || || | | |||
Sbjct 877268 ATGATCAAGGGGAAGTCCCCCGACGAGATCCGGAAGACTTTCAATATTACGAACG 877322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107124756615792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |