Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq132 178 2e-38 seq44 132 6e-25 seq99 127 2e-23 seq11 114 2e-19 seq98 100 3e-15 >seq132 Length=2107841 Score = 178 bits (196), Expect = 2e-38 Identities = 263/373 (71%), Gaps = 0/373 (0%) Strand=Plus/Plus Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925 || ||| |||||||| || || | | | || ||| || | |||||||| || || Sbjct 460152 GAAGGCAACATGCCCCACGTCATCATCTCTGGAATGCCAGGTATCGGCAAGACGACAAGT 460211 Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985 ||| ||||| ||||| | | || | ||| | |||||||| || |||||| Sbjct 460212 ATCCACTGTCTCGCGCGGCAATTACTCGGAGACGCCTATAAGGAGGCCGTACTAGAACTC 460271 Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045 ||||| ||||| | ||| |||||||||||||||| |||||| | |||| Sbjct 460272 AACGCCAGTGACGAAAGAGGCATCGACGTCGTGCGCAACCGAATCAAGGGCTTCGCCCAA 460331 Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105 |||| || ||| |||||||| ||||||||| | ||||||||||||| |||||| || Sbjct 460332 AAGAAAGTCACCCTCCCGCCCGGCCGCCACAAGCTCGTCATCCTCGACGAAGCCGACAGC 460391 Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165 | || |||| || || |||||||| || |||||||||| || ||||||||||| Sbjct 460392 ATGACTTCGGGCGCGCAACAGGCCCTCCGCCGAACCATGGAAATCTACTCCAACACGACG 460451 Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225 || || ||| | ||||||||| || | | | |||||| |||| ||| |||||| Sbjct 460452 CGATTCGCCTTCGCGTGCAACCAATCTAACAAGATTATCGAGCCCCTGCAATCCCGCTGC 460511 Query 1574226 GCCATTCTGCGCT 1574238 || ||||| |||| Sbjct 460512 GCTATTCTTCGCT 460524 >seq44 Length=1380919 Score = 132 bits (146), Expect = 6e-25 Identities = 268/395 (68%), Gaps = 12/395 (3%) Strand=Plus/Minus Query 18097 TTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATG 18156 || || || || ||||| | |||||| |||||||||||| | || || ||||| Sbjct 965389 TTCGGTGAATCCCACGGCAAAGCCGTCGGGTGCATCATCGACAACCCACCCCCCGGCATG 965330 Query 18157 CCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCA 18216 | || |||| |||||||||| || || | | || ||||| || ||||| || | Sbjct 965329 ACCCTCACCGAATCCGACATCCAACCCCAACTCAACCGCCGCCGCCCAGGCCAAAGCTCC 965270 Query 18217 CTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGC 18276 | ||||||| ||| |||| || ||||| | |||||| || ||||| || |||| Sbjct 965269 ATCACCACGCCTCGCGACGAAAAGGACCGCGTAACCATCCAATCCGGCACCGAATTCGGC 965210 Query 18277 CTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGAC 18336 || |||||| | ||| || ||||| | || ||| |||||||| ||| ||| Sbjct 965209 AAGACCCTCGGCACCCCCATCAGCCTCGTCGTCATGAACGAGGACCAGCGCCCCAAGGAC 965150 Query 18337 TATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATG 18390 || | ||| | || || ||||| || || |||||||||| ||||||| | Sbjct 965149 TACGGCAACAAGACCATGGACGTCTACCCGCGCCCTTCCCACGCCGACTTCACCTACCTC 965090 Query 18391 GCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCT---GCCCGCGAGACC 18447 | || |||||||||||||| | | |||| ||| || | | ||||||||||| Sbjct 965089 GAGAAATACGGCATCAAGGC--CAGC-AGCGGTGGCGGGAGGAGTAGCGCCCGCGAGACT 965033 Query 18448 CTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 | ||| || || |||||||| ||||| ||||| Sbjct 965032 ATTGCGCGTGTGGCGGCCGGCGCTGTCGCTGAGAA 964998 Score = 91.5 bits (100), Expect = 2e-12 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107 |||||| ||||||||| || || ||||| || ||||||||| | || |||||||||| Sbjct 964761 ACAGCACCGGCGGCACCGTCACCTGCGTTATCCGAAACGTGCCGTCGGGTCTCGGCGAGC 964702 Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167 | ||| |||||| | |||||| | ||| || |||||| || ||||| ||| || Sbjct 964701 CCGCCTTCGACAAGCTTGAGGCCAAGATCGGTCATGCCATGATGAGCATCCCCGCCGTCA 964642 Query 19168 AGGGATTCGAGATTGGCAGCGGGTT 19192 ||| ||||| || ||| ||| || Sbjct 964641 AGGCCTTCGAAATCGGCTCCGGCTT 964617 >seq99 Length=2343619 Score = 127 bits (140), Expect = 2e-23 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 2127304 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATG 2127245 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | | ||||| ||| || |||||| | || Sbjct 2127244 TTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCTCATTTCCGAGGGCGACG 2127185 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| | ||||||||| ||||| |||||||| ||||||| ||||||||||||| Sbjct 2127184 AGCAGCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGC 2127125 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 || || || || | ||| | | ||||| | |||||||| |||||| || Sbjct 2127124 AGGGCACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGCATC 2127072 >seq11 Length=1169955 Score = 114 bits (126), Expect = 2e-19 Identities = 261/390 (67%), Gaps = 17/390 (4%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | || |||| ||| ||||| || |||||||| | | |||||||||| Sbjct 977610 TGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGAC 977669 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 || || || ||||| | || | ||| | |||||| | || | | |||| Sbjct 977670 GTTCCATTTGTCCCCGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGTTGAGGCCG 977729 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| |||||| || ||||| | ||||| ||| || | |||||| || || ||||| Sbjct 977730 ATGCCACCGGCCATTTTTGAGATCATTGCGCA-TGTCTTCAACGTGTCATAAATTCCCTC 977788 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || |||||||||| ||||| ||||| || || || | || | ||||| Sbjct 977789 AATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGGGGGGTGCC 977848 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||| ||||| ||||| | || ||||| || | |||||| | ||| || Sbjct 977849 GGCGTTAAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGT 977908 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | | ||| ||| | | ||||| || ||| ||| |||| |||||| Sbjct 977909 CTCAATCACACGCTCAACGTCATCGCCC-------CAA----ATA----CCGACGGCGAC 977953 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGAC 1630454 ||||| | ||||| ||| || |||||||| Sbjct 977954 ACGCATAATCATGTGCTGAGGTCGCTCGAC 977983 >seq98 Length=1174881 Score = 100 bits (110), Expect = 3e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| | ||||| || ||||||||||| || || || | || |||||| | || |||||| Sbjct 877208 GCCTCGAACTATCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 877267 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||||| ||||| |||||||| ||||| || || || | | ||| Sbjct 877268 ATGATCAAGGGGAAGTCCCCCGACGAGATCCGGAAGACTTTCAATATTACGAACG 877322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107124756615792