Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq11 192 5e-44 seq121 105 6e-18 seq110 86.0 6e-12 >seq11 Length=1169955 Score = 192 bits (212), Expect = 5e-44 Identities = 973/1536 (63%), Gaps = 66/1536 (4%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| |||||||| ||||| || || || ||||||||| |||| | || Sbjct 976556 GTTGACGACCTGGAATTCACCTGCCAAGACACGTCGTTGGTAAATGTTCGAGGTGTATGG 976615 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||||| |||||||||| || ||||| |||| ||| | || || |||||| |||| Sbjct 976616 TTCAAAGCATTCGTTGTTCCCGAGAATTTGAGAGGTGCTTGCAGTGGGCATGGGGGCCAA 976675 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 |||||| || || | || || ||||||| | ||||| || | ||||| ||| Sbjct 976676 CAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCCCAGTTCCA 976735 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 ||| || || || |||||||| |||||||| | ||||| | ||||| Sbjct 976736 CAAGTCCGAGGGCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGA 976795 Query 138741 GCCTTCGTACGAATCGTATACA--CCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGC 138798 || ||||||| ||| ||| || ||| | || | ||| | ||| || || Sbjct 976796 ACCCTCGTACG--TCGAATAGGGGCCCTGCTCCTTGGCGATCTCCATTGACGCTTCCAGA 976853 Query 138799 GCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCG 138858 || | | ||| || || ||| || || ||||||| |||||||||| | ||| Sbjct 976854 GCGGCGTGGTAGATTGTCTCGAAGATTTGAATATTGAGCTGCCGGGCCTCGGGGGATTCG 976913 Query 138859 TACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGG 138918 | ||||| || || ||| || || |||| |||||||| ||||| || | || Sbjct 976914 AAGGGCATACGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACACCCACACCAATGGGC 976973 Query 138919 CGATGGCGCAGATTTGACGCTTTTGCGG----CTTCGATAGGATAATAGTTTACATCGAT 138974 || ||||||| ||| ||| |||||| | | | || || || || ||||| || Sbjct 976974 CGGTGGCGCATATT----GCTGTTGCGGGCCTCCTGCACCGGGTAGTAATTGACATCAAT 977029 Query 138975 GATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTA 139034 ||| || || | |||||| ||||| ||||| || | | | | ||||| ||||| Sbjct 977030 GATCTTATTGAGATTTCGAACGACGACCTTGGTTACTTCGTGGAGTTTCTCAAAGTCGTA 977089 Query 139035 TGTGCCCCCGTTGTCGTCGACGA-CGTCGACAAATTTGTTGACACAAATCGAGGCTATGT 139093 |||| ||||| |||||||| || | ||| | || | ||| || | || Sbjct 977090 CTCGCCCTTGTTGTAGTCGACGAACGAGGGCAA-------GGCA---AGCGATGCCAAGT 977139 Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTAC 139153 |||| ||||||||||| || || | ||| |||| || |||| || | ||| | Sbjct 977140 TGCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGGTGCAGAGATTGGAGC 977199 Query 139154 ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCA 139213 ||| || || | || | ||| ||||| || ||||| || || |||||||||| Sbjct 977200 TGCGGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCA 977259 Query 139214 TATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCT---AG 139270 | | || | || ||||| || | ||| | ||| | || || | | || Sbjct 977260 TGAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATG---GCGTACCAGAGCTTTTGAG 977316 Query 139271 CTT---GTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGA 139327 | | | | | || || | | || ||| |||||||| || | | |||| Sbjct 977317 CCTTGAGAGTCTTGCGACCG---CGGCCTTCCTTCTCATACTTTTCATACAAGGCCTCGA 977373 Query 139328 ATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATA 139387 | ||||| ||| || | ||| || | || | || || ||||| || | ||| Sbjct 977374 ACTCCTCACCATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGT 977433 Query 139388 CGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAAT 139447 |||||||| | || ||| ||||||| ||||| |||||||| | |||| | | || Sbjct 977434 CGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGAT 977493 Query 139448 CGCGCGC-----CTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCA 139500 | || || | |||| | | ||| || | | || | | || | ||| || Sbjct 977494 CCCGGGCTCGAACCTCTTCTTTGCCG------TGGTTC-TTGCGAAGGTCCAAGAACTCG 977546 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCA 139557 || || || |||||||||||||| || |||||||| | || || || || ||| Sbjct 977547 AATACATCTGCGTGCCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCA 977606 Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617 ||||| || |||| | | | || ||||| || || | ||| || | ||| | Sbjct 977607 CCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTG 977666 Query 139618 GCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATT 139673 | ||||| || || || | ||| | |||| ||| || | | ||| | || Sbjct 977667 GACGTTCCATTTGTCCCCGCAATATATGAGCCTGTGGCG----CGAATGCGATGGATGTT 977722 Query 139674 GATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATA 139732 || |||||| || ||| | | ||| || || | ||| || | | || || || || | Sbjct 977723 GAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGC-ATGTCTTCAACGTGTCATAAA 977781 Query 139733 TACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTT 139792 | || || || || |||| ||| ||| || |||||||| || || || | | | Sbjct 977782 TTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGGG 977841 Query 139793 TCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATT 139852 |||||||| ||| ||||| || || || ||||| | || |||||| | | Sbjct 977842 GGGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGAT 977901 Query 139853 CGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCA 139912 |||||| || || | | | ||| || || |||||||| | ||| ||||| | Sbjct 977902 TGTACGTCTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATAA 977961 Query 139913 GCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTC 139970 ||| || || || ||| | | | || |||| ||| || || ||||| || Sbjct 977962 TCATGTGCTGAGGTCGCTCGACAATCTTCCCATCGAGTTTCAGGAGGTACGACCGT--TC 978019 Query 139971 TAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||||||||| |||| ||||| || |||||||| Sbjct 978020 GAGGGTCTTGAAGCCGAAGTATTGGTAATTGAAATC 978055 >seq121 Length=2448542 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| ||||| |||||||| ||||| || | || Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || ||||| || |||||||| Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || |||||||| || ||||| ||||| | | | || ||||| || Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 310949 ATCCAGAAGGAGTCCACGCTCCA 310971 >seq110 Length=3171699 Score = 86.0 bits (94), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| || || || || || || || || | ||||| | || | Sbjct 54416 AAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATCGACAAT 54475 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||| || ||||| || ||||| |||||||||||||| ||| | || || Sbjct 54476 GTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCTTATTTTC 54535 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 ||||| || ||||| |||||| | | | | || ||||| || ||||| |||| Sbjct 54536 GCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAGG 54590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896610225280