Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq132 154 2e-31 seq99 143 4e-28 seq98 95.1 2e-13 >seq132 Length=2107841 Score = 154 bits (170), Expect = 2e-31 Identities = 303/445 (68%), Gaps = 16/445 (4%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || |||||||||||| || || | | | || ||| || | |||||||| || || Sbjct 460152 GAAGGCAACATGCCCCACGTCATCATCTCTGGAATGCCAGGTATCGGCAAGACGACAAGT 460211 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC---GAGGCCGTGCTCGAA 2019119 ||| || || ||||| || || || | |||| | |||||||| || ||| Sbjct 460212 ATCCACTGTCTCGCGCG---GCAATTACTCGGAGACGCCTATAAGGAGGCCGTACTAGAA 460268 Query 2019120 CTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCT 2019179 ||||| || ||||| | ||| | ||||||||||| | |||||| ||| Sbjct 460269 CTCAACGCCAGTGACGAAAGAGGCATCGACGTCGTGCGCAACCGAATCAAGG-----GCT 460323 Query 2019180 TCG---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGG 2019234 ||| ||||||| || ||| |||||||||||||||||| | |||||||||| || | Sbjct 460324 TCGCCCAAAAGAAAGTCACCCTCCCGCCCGGCCGCCACAAGCTCGTCATCCTCGACGAAG 460383 Query 2019235 CCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCA 2019294 ||||| || | || |||| || || ||||||||||| |||||||||| ||| ||| Sbjct 460384 CCGACAGCATGACTTCGGGCGCGCAACAGGCCCTCCGCCGAACCATGGAAATCTACTCCA 460443 Query 2019295 ACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGA 2019354 |||||||||| || || | || |||||| || | | | ||||| |||| || Sbjct 460444 ACACGACGCGATTCGCCTTCGCGTGCAACCAATCTAACAAGATTATCGAGCCCCTGCAAT 460503 Query 2019355 GCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGC 2019414 ||| ||||| || | |||| |||| | || ||||| ||| | | | | ||| Sbjct 460504 CCCGCTGCGCTATTCTTCGCTACTCGCGGTTAACGGACGCGCAGGTGGTGAAGAGGCTGA 460563 Query 2019415 GCGAGATTATCGACGCCGAAAAGGT 2019439 |||| ||||| || |||||||| Sbjct 460564 TGCAGATCATCGAGGCGGAAAAGGT 460588 >seq99 Length=2343619 Score = 143 bits (158), Expect = 4e-28 Identities = 195/270 (72%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932 |||||| || || | ||||||| ||||| || || || || ||| |||||| | Sbjct 2127330 TCCTCTTAGTGCTGGCCATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGA 2127271 Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992 ||||||||||||| |||| ||||| |||||| | ||| ||||||| | | || Sbjct 2127270 AGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGT 2127211 Query 793993 AGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050 || |||||| ||||| ||||| ||||| | |||||||||||| ||||||||||| Sbjct 2127210 AGATCTTCTCATTTCCGAGGGCGACG--AGCAGCCTGTCGGCGACGAACTCAATGTACTG 2127153 Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTC 794110 ||||||| ||||||||||||| || || ||| || | ||| ||| ||||| Sbjct 2127152 CTTCATGAGGTTCGCGTTCATGCCGAGCAGGGCACAGGGGAGGGCCTCAGTGAGGAACTC 2127093 Query 794111 TTTCTCGATCTCGACGGCCTCGATGATGAT 794140 | |||||||| |||||| || | ||||| Sbjct 2127092 CTGCTCGATCTTGACGGCATCAGTAATGAT 2127063 Score = 98.7 bits (108), Expect = 2e-14 Identities = 96/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606 || || |||||| |||||||| || || || | | || ||||||| |||||| || || Sbjct 2126710 GTCTCAATGGCGTTGAAGAGGTGAGTTCT-CTGGGCGGGCTCCTTGATGTAGGTATCAAT 2126652 Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||| ||||||||||| ||||||||||| || || ||||||||| || || ||||| Sbjct 2126651 GAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 2126592 Query 794667 G 794667 | Sbjct 2126591 G 2126591 >seq98 Length=1174881 Score = 95.1 bits (104), Expect = 2e-13 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| | ||||| || |||||||||||||| || || | || |||||||| || |||||| Sbjct 877208 GCCTCGAACTATCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 877267 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||| ||||| ||||| || ||||| ||||| || || || | | ||| Sbjct 877268 ATGATCAAGGGGAAGTCCCCCGACGAGATCCGGAAGACTTTCAATATTACGAACG 877322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916227678077264