Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq165 129 6e-25
seq121 111 2e-19
seq110 98.7 1e-15
>seq165
Length=1469810
Score = 129 bits (142), Expect = 6e-25
Identities = 148/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| || ||||| || | ||| ||||||||||||||||||
Sbjct 93443 GGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 93502
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||| |||||||| |||||||| |||||||| |||||| |||
Sbjct 93503 GGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 93562
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||| | || ||| || |||| ||||| ||| ||||| || || ||
Sbjct 93563 GACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGT 93622
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| || ||||||
Sbjct 93623 CTTGACGAAGATTTGCATG 93641
>seq121
Length=2448542
Score = 111 bits (122), Expect = 2e-19
Identities = 139/188 (74%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| |||||||| ||| | ||| | | | |||||||||||||||||
Sbjct 310509 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 310451
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || || ||||| ||||| || || |||||||| |||||| |||
Sbjct 310450 GGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT 310391
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| | ||| || |||| ||||| ||| |||||||| || ||
Sbjct 310390 AACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGT 310331
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 310330 CTTGACGA 310323
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| ||||||||||| | ||| ||| |||||| |||||||||||
Sbjct 310965 GTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACC-GTCCTCAAGCTGCTTGCC 310907
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| ||||||| |||||||| ||||| || || || |||||||| ||||| |||
Sbjct 310906 GGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTT 310847
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || |||| | ||| || || | || | |||||||||||| || ||
Sbjct 310846 CACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGTAAGGGT 310787
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 310786 CTTGACAAAGATCTGCAT 310769
Score = 109 bits (120), Expect = 5e-19
Identities = 131/176 (74%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520
|||||| || ||||| ||||||||||| | || || | |||||| ||||||||
Sbjct 310200 GGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCC--GTCCTCAAGCTGCTTT 310143
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| |||| || ||||| |||||||| |||||||| |||||||| |||||| |
Sbjct 310142 CCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGAC 310083
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|||| | || | || || | || ||| || |||| ||||| ||| ||||||||
Sbjct 310082 TTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 310027
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || |||||||| | ||| | | | || || || ||||| |
Sbjct 310738 GGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCA-TCTTCCAGTTGCTTAC 310680
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || || |||||||||||||||||||| ||||| || ||||| ||
Sbjct 310679 CAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACT 310620
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | ||||| | | || || |||| ||| | || ||||| || ||||
Sbjct 310619 TAACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAG 310560
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 310559 TCTTCACGAAAATCTGCAT 310541
>seq110
Length=3171699
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| ||||||||||| | ||| | | | |||||||||||||| || ||| ||||
Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTTCCGGCGAAAAT 54530
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| ||||| || ||||||||||| || |||||||| ||||| ||| | | ||
Sbjct 54529 AAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTC 54470
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| |||||| | || ||| || || | ||||| ||| || || || || || || |||||
Sbjct 54469 GATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 54410
Query 133652 A 133652
|
Sbjct 54409 A 54409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419736474240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |