Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq165 129 6e-25 seq121 111 2e-19 seq110 98.7 1e-15 >seq165 Length=1469810 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| || | ||| |||||||||||||||||| Sbjct 93443 GGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 93502 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| |||||||| |||||||| |||||||| |||||| ||| Sbjct 93503 GGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 93562 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| ||||| ||| ||||| || || || Sbjct 93563 GACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGT 93622 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| || |||||| Sbjct 93623 CTTGACGAAGATTTGCATG 93641 >seq121 Length=2448542 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| |||||||| ||| | ||| | | | ||||||||||||||||| Sbjct 310509 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 310451 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | || || ||||| ||||| || || |||||||| |||||| ||| Sbjct 310450 GGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT 310391 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || |||| ||||| ||| |||||||| || || Sbjct 310390 AACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGT 310331 Query 133643 TTTTACGA 133650 || |||| Sbjct 310330 CTTGACGA 310323 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| ||||||||||| | ||| ||| |||||| ||||||||||| Sbjct 310965 GTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACC-GTCCTCAAGCTGCTTGCC 310907 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || ||||||| |||||||| ||||| || || || |||||||| ||||| ||| Sbjct 310906 GGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTT 310847 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || |||| | ||| || || | || | |||||||||||| || || Sbjct 310846 CACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGTAAGGGT 310787 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 310786 CTTGACAAAGATCTGCAT 310769 Score = 109 bits (120), Expect = 5e-19 Identities = 131/176 (74%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 |||||| || ||||| ||||||||||| | || || | |||||| |||||||| Sbjct 310200 GGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCC--GTCCTCAAGCTGCTTT 310143 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| |||| || ||||| |||||||| |||||||| |||||||| |||||| | Sbjct 310142 CCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGAC 310083 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 |||| | || | || || | || ||| || |||| ||||| ||| |||||||| Sbjct 310082 TTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 310027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || |||||||| | ||| | | | || || || ||||| | Sbjct 310738 GGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCA-TCTTCCAGTTGCTTAC 310680 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || || |||||||||||||||||||| ||||| || ||||| || Sbjct 310679 CAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACT 310620 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | || || |||| ||| | || ||||| || |||| Sbjct 310619 TAACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAG 310560 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 310559 TCTTCACGAAAATCTGCAT 310541 >seq110 Length=3171699 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| ||||||||||| | ||| | | | |||||||||||||| || ||| |||| Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTTCCGGCGAAAAT 54530 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||| || ||||||||||| || |||||||| ||||| ||| | | || Sbjct 54529 AAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTC 54470 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | || ||| || || | ||||| ||| || || || || || || ||||| Sbjct 54469 GATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 54410 Query 133652 A 133652 | Sbjct 54409 A 54409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419736474240