Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq99 149 9e-30 seq132 141 1e-27 seq11 120 4e-21 >seq99 Length=2343619 Score = 149 bits (164), Expect = 9e-30 Identities = 241/340 (71%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||||||||| || ||||| ||||| ||| | || | Sbjct 2126378 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATC 2126436 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| | || |||||| ||||| Sbjct 2126437 TCTCCAAGGATCTCCACG----ACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTC 2126492 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||| | || ||||| || ||||||| |||||| ||||| ||||||||| | Sbjct 2126493 ATCTCGCACATTCTTGCCTTCTT-CGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGT 2126551 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||||| | || ||||| || | || ||||| |||||||| Sbjct 2126552 TGAGCGATTCAGCGCTGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGAT 2126611 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| ||||| || || |||||| ||||||| Sbjct 2126612 CATGATGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATTGATACCTACATCAAGGA 2126671 Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACAC 1456106 || | | || || || |||||||| |||||| || || Sbjct 2126672 GCCCGCCCAG-AGAACTCACCTCTTCAACGCCATTGAGAC 2126710 Score = 132 bits (146), Expect = 7e-25 Identities = 192/266 (72%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 1456516 CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575 |||| | ||||| || |||||| |||||||| | ||||| ||| ||| | || || Sbjct 2127056 CAAGGACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCC 2127115 Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635 || || ||||||||||||| | | |||||| ||||||||||| || |||||| Sbjct 2127116 CTGTGCCCTGCTCGGCATGAACGCGAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCC 2127173 Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 ||| | ||||||| || ||||| | ||||| |||| || | ||||||| ||| Sbjct 2127174 GACAGGCTGCTCGTCGCCCTCGGAAATG-AGAAGATCTACAGGTCCACCAACCCCTTCGA 2127232 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754 | |||||| ||||| |||| |||||||||||||| |||||| || | ||| || Sbjct 2127233 CTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 2127292 Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780 ||| ||||||||||||| |||| Sbjct 2127293 CTACCAGAAGGCCGGCGTCATGGCCA 2127318 >seq132 Length=2107841 Score = 141 bits (156), Expect = 1e-27 Identities = 255/373 (68%), Gaps = 0/373 (0%) Strand=Plus/Minus Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933 |||| || || || || ||| ||||||| |||||| | | | || |||||| | Sbjct 460524 AGCGAAGAATAGCGCAGCGGGATTGCAGGGGCTCGATAATCTTGTTAGATTGGTTGCACG 460465 Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993 | | ||| || |||||||| |||| | |||||||||| |||||||||||||| | Sbjct 460464 CGAAGGCGAATCGCGTCGTGTTGGAGTAGATTTCCATGGTTCGGCGGAGGGCCTGTTGCG 460405 Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCA 333053 | ||| || | || |||||| ||||||||||||| || ||||||||| ||| |||| | Sbjct 460404 CGCCCGAAGTCATGCTGTCGGCTTCGTCGAGGATGACGAGCTTGTGGCGGCCGGGCGGGA 460345 Query 333054 GATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCT 333113 | || | || |||| | ||||| |||||||||||||| | ||| | | Sbjct 460344 GGGTGACTTTCTTTTGGGCGAAGCCCTTGATTCGGTTGCGCACGACGTCGATGCCTCTTT 460285 Query 333114 CGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCG 333173 |||| ||||||||||| || |||||||| | ||| | || | | |||| Sbjct 460284 CGTCACTGGCGTTGAGTTCTAGTACGGCCTCCTTATAGGCGTCTCCGAGTAATTGCCGCG 460225 Query 333174 CCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGG 333233 | || || ||| || || |||||||| | || ||| || | | | || || || Sbjct 460224 CGAGACAGTGGATACTTGTCGTCTTGCCGATACCTGGCATTCCAGAGATGATGACGTGGG 460165 Query 333234 GCATGTTGCCGTC 333246 |||||||||| || Sbjct 460164 GCATGTTGCCTTC 460152 >seq11 Length=1169955 Score = 120 bits (132), Expect = 4e-21 Identities = 183/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| |||||||| |||||||| || | | ||| || || ||||| || | ||| Sbjct 977866 CCCACTCTCTTTAACGCCGGCACCCCCCAAGCCCAGCTGTCTTCATGCTTCCTCGTCGAC 977807 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| || ||||||||| | ||| ||||| | ||||| Sbjct 977806 ATGAAGGATGATAGTATTGAGGGAATTTATGACACGTTGAAGACATGCGCAATGATCTCA 977747 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGG--TGCGCGCCGCGGGCGCCTACG 260102 || |||||| |||||||| | | || || | | |||||| | ||| | || Sbjct 977746 AAAATGGCCGGTGGCATCGGCCT--CAACATCCATCGCATTCGCGCCACAGGCTCATATA 977689 Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162 | ||||| || || || |||||||||| || | ||||||||||| || || ||| ||| Sbjct 977688 TTGCGGGGACAAATGGAACGTCCAACGGCATTATTCCCATGCTTCGTGTCTTCAACAACA 977629 Query 260163 CGGCGCGCTACGTCGACCA 260181 | || | ||||| ||||| Sbjct 977628 CCGCCAGGTACGTTGACCA 977610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177794224476512