Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 3e-15 seq121 87.8 2e-12 seq165 86.0 5e-12 >seq11 Length=1169955 Score = 96.9 bits (106), Expect = 3e-15 Identities = 283/433 (65%), Gaps = 5/433 (1%) Strand=Plus/Plus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 ||| |||||| |||| ||||| || | ||| ||||||||| ||||||||||||||| || Sbjct 977402 GGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAA 977461 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 | ||| || | ||| | |||| || ||||| | ||| ||||||| | || | Sbjct 977462 AAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCTCGAACCTCTTCT-TTGCCGT 977520 Query 131722 AAtttttttCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTG 131780 || || || | || || || || | || || ||||| ||||| | || | | Sbjct 977521 GGTTCTTGCGAAGGTCCAAGAACTCGAATACATCTGCGTGCCATGGTTCAAGGTAGATGG 977580 Query 131781 CCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837 | | || || |||| ||||| ||||| | ||| | | | |||||||| | | Sbjct 977581 CAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGA 977640 Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897 | || | |||||| | ||||||| ||||||| || | | ||| || ||| Sbjct 977641 CACGAAGCATGGGAATAATGCCGTTGGACGTTCCATTTGTCCCCGCAATATATGAGCCTG 977700 Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGC 131957 |||| | || || | |||||| || || || ||| | ||| ||||| | ||||| Sbjct 977701 TGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGC 977760 Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGC 132017 || | | | |||| ||| || || || | || || | |||||||| | |||| Sbjct 977761 ATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGC 977820 Query 132018 AAGAGGACAACTG 132030 | || |||| ||| Sbjct 977821 ATGAAGACAGCTG 977833 >seq121 Length=2448542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103 ||| | ||| || || || || |||||||| || | |||| |||| || ||||| Sbjct 310972 ATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTG 310913 Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 || ||||| ||||||||||||| ||||| || || | ||||| || || ||||| Sbjct 310912 CTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTT 310853 Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 |||| | || | || || | | |||||||| || || || | |||||| || Sbjct 310852 CGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGT 310793 Query 27224 CAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || || |||||||| |||||| || Sbjct 310792 AAGGGTCTTGACAAAGATCTGCATACCT 310765 >seq165 Length=1469810 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| |||| |||||||| || ||| Sbjct 93444 GTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 93503 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || |||||||| || || || | ||||| || || ||||||| || Sbjct 93504 GCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 93563 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || || || || || || || | |||||||| || || Sbjct 93564 ACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTC 93623 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 93624 TTGACGAAGATTTGCAT 93640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933488515712