Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq11 96.9 3e-15
seq121 87.8 2e-12
seq165 86.0 5e-12
>seq11
Length=1169955
Score = 96.9 bits (106), Expect = 3e-15
Identities = 283/433 (65%), Gaps = 5/433 (1%)
Strand=Plus/Plus
Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661
||| |||||| |||| ||||| || | ||| ||||||||| ||||||||||||||| ||
Sbjct 977402 GGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAA 977461
Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721
| ||| || | ||| | |||| || ||||| | ||| ||||||| | || |
Sbjct 977462 AAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCTCGAACCTCTTCT-TTGCCGT 977520
Query 131722 AAtttttttCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTG 131780
|| || || | || || || || | || || ||||| ||||| | || | |
Sbjct 977521 GGTTCTTGCGAAGGTCCAAGAACTCGAATACATCTGCGTGCCATGGTTCAAGGTAGATGG 977580
Query 131781 CCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837
| | || || |||| ||||| ||||| | ||| | | | |||||||| | |
Sbjct 977581 CAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGA 977640
Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897
| || | |||||| | ||||||| ||||||| || | | ||| || |||
Sbjct 977641 CACGAAGCATGGGAATAATGCCGTTGGACGTTCCATTTGTCCCCGCAATATATGAGCCTG 977700
Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGC 131957
|||| | || || | |||||| || || || ||| | ||| ||||| | |||||
Sbjct 977701 TGGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGC 977760
Query 131958 ATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGC 132017
|| | | | |||| ||| || || || | || || | |||||||| | ||||
Sbjct 977761 ATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGC 977820
Query 132018 AAGAGGACAACTG 132030
| || |||| |||
Sbjct 977821 ATGAAGACAGCTG 977833
>seq121
Length=2448542
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103
||| | ||| || || || || |||||||| || | |||| |||| || |||||
Sbjct 310972 ATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTG 310913
Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163
|| ||||| ||||||||||||| ||||| || || | ||||| || || |||||
Sbjct 310912 CTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTT 310853
Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223
|||| | || | || || | | |||||||| || || || | |||||| ||
Sbjct 310852 CGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTGCCGGT 310793
Query 27224 CAGAGTTTTCACAAAGATTTGCATAGCT 27251
|| || || |||||||| |||||| ||
Sbjct 310792 AAGGGTCTTGACAAAGATCTGCATACCT 310765
>seq165
Length=1469810
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| | | |||| |||| |||||||| || |||
Sbjct 93444 GTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 93503
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || || |||||||| || || || | ||||| || || ||||||| ||
Sbjct 93504 GCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 93563
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||| | || || || || || || || | |||||||| || ||
Sbjct 93564 ACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTC 93623
Query 27231 TTCACAAAGATTTGCAT 27247
|| || |||||||||||
Sbjct 93624 TTGACGAAGATTTGCAT 93640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933488515712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |