Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq11 237 2e-57 seq99 98.7 1e-15 seq143 84.2 3e-11 >seq11 Length=1169955 Score = 237 bits (262), Expect = 2e-57 Identities = 901/1394 (65%), Gaps = 29/1394 (2%) Strand=Plus/Plus Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 |||| ||||| | |||||||||||||||||||| || || || | ||||| | |||| Sbjct 976594 GGTAAATGTTCGAGGTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGAGGTGC 976653 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 || || ||||| || |||| |||||| |||||||| | || | || |||||| | | Sbjct 976654 TTGCAGTGGGCATGGGGGCCAACAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCT 976713 Query 110826 CCTTGAGAACATCCCAGT---CGTAGT-TGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881 |||| ||| ||||||||| ||| ||| || || || || ||||||||| || Sbjct 976714 CCTTCAGAGCATCCCAGTTCCACAAGTCCGAG---GGCTTGACATT-CCACATGTCGTAC 976769 Query 110882 TGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA 110941 || || | ||||| || ||||||||||||| | || ||||| || || | | Sbjct 976770 TGGAGAATTCCTTGAGAGACGGGAGAACCCTCGTACGTCGAATAGGGGCCCTGCTCCTTG 976829 Query 110942 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 111001 || | || ||| ||||| | ||||| || || || || ||||| || ||| Sbjct 976830 GCGATCTCCATTGACGCTTCCAGAGCGGCGTGGTAGATTGTCTCGAAGATTTGAATATTG 976889 Query 111002 ATCTCCTTGGCTTCATCTGAATC-AAATGCGTA-GCGGCACAAAATAAATACATCCGCGA 111059 | || | ||| || || || || || || || | | || || ||||||| | Sbjct 976890 AGCTGCCGGGCCTCGGGGGATTCGAAGGGCATACGCAGGGC--AAGGAAGGCATCCGCCA 976947 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119 ||||| ||||||| |||||| || | ||| |||||||| || || || || | Sbjct 976948 ATCCTTGCACACCCACACCAATGGGCCGGTGGCGCATATTGCTGTTGCGGGCCTCCTGCA 977007 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 | || || |||| ||||||| || |||||| || | ||| || | || Sbjct 977008 CCGGGTAGTAATTGACATCAATGATCTTATTGAGATTTCGAACGACGACCTTGGTTACTT 977067 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 | || ||||| ||| | || | || | | | | ||| || || | ||| | Sbjct 977068 CGTGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGACGAACGAGGGCAAGGCAA 977127 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 |||||||| |||||||| ||| |||||| | | | |||||| | || || || | Sbjct 977128 GCGATGCCAAGTTGCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGGTGC 977187 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | | ||||| || || || || | ||||||||||| ||||| |||||| | Sbjct 977188 AGAGATTGGAGCTGCGGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGT 977247 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418 ||||||| |||||| | || | || || || ||||| | | | || || | ||| | Sbjct 977248 CCTTGTAAAGCATGAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATGGCGTACCAGA 977307 Query 111419 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 | | | | || | | | | | | || || ||| ||| |||||| || | | Sbjct 977308 GCTTTTGAGCCTTG-AGAGTCTTGCGACCGCGGCCTTCCTTCTCATACTTTTCATACAAG 977366 Query 111479 GCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAA 111536 || || ||||||||| ||| || |||| || || || || || || || || | | Sbjct 977367 GCCTCGAACTCCTCA-CCATAGCAATCGGCAAGGCC-GGGGCATTCGTTGGGGCACATCA 977424 Query 111537 GAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596 | | ||| | || | ||||| |||||||||||||| || |||||||| || | Sbjct 977425 GGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGA 977484 Query 111597 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 111656 |||||||| | ||| ||||||| | || ||||| || | || | ||||| Sbjct 977485 GGAAGAGATCCCGGGCTCGAACCTCTTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACT 977544 Query 111657 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCC 111713 | | | ||| ||||||||||| ||||| |||| || | | |||| || | | Sbjct 977545 CGAATACATCTGCGTGCCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTAC 977604 Query 111714 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 111773 || |||| | || || | || ||| ||| || || |||||||| |||||||| || | Sbjct 977605 CACCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGT 977664 Query 111774 CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCA 111833 || |||||||||||| |||| || |||| | | |||||||| | Sbjct 977665 TGGACGTTCCATTTGTCCCCGCAATATATGAGCCTGTGGCGCGAATGCGATGGATGTTGA 977724 Query 111834 TCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGAT 111891 || || || || ||| |||||||| ||||| || | | | || |||| || Sbjct 977725 GGCCGATGCCACCGGCCATTTTTGAGATCATTGCG--CATGTCTTCAACGTGTCATAAAT 977782 Query 111892 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 111951 || | || || ||||| || ||| |||||||| |||| ||| | | || Sbjct 977783 TCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGGGG 977842 Query 111952 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTG 112009 || || || || ||||| || |||| || ||| ||| | | |||| ||||| Sbjct 977843 GGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGAGTGA--AGAATTTGGACGACATTAGA 977900 Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069 | ||| ||||| | ||| |||| ||| || || || |||| ||||| ||||| Sbjct 977901 TTGTACGTCTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATA 977960 Query 112070 AACATGTACTGTGG 112083 | ||||| ||| || Sbjct 977961 ATCATGTGCTGAGG 977974 >seq99 Length=2343619 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || ||||| || || ||||| |||||| ||||| ||||| || || Sbjct 2126996 GTGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATAAGGCC 2126937 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| |||| | | ||| | ||| ||||||||||||||| || Sbjct 2126936 GCGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACGGC 2126877 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| ||||| | ||||||| Sbjct 2126876 AGCGAAGGCAACGAGGCGCTGAGCGAAGG 2126848 >seq143 Length=1841144 Score = 84.2 bits (92), Expect = 3e-11 Identities = 163/236 (69%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 11707 ACCCACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGCACTGGATGAATGGGACA 11764 ||| ||||| |||||||||||||| || | | | || || | ||| | ||| ||||| Sbjct 1524955 ACCAACACCGACAAACATCTCCACGAATTCCGACCCGCTGA-CGCTGAA-GAAGGGGACC 1525012 Query 11765 TTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCG 11824 | | || || || |||| ||| || |||||||| || ||||| || ||| || Sbjct 1525013 TCGCACTCGCCGGCCGTGGCCTTGGCAAGAAGGGTCTTACCAGTACCGGGGGGACCAGCC 1525072 Query 11825 AGAAGGGCGCCTCGGGGGATCTTGGCACC---ACTTCCAAAATATCTCTCGGGTTGCTTG 11881 |||| ||| || ||||| ||||||||||| |||| || | ||||||| |||| Sbjct 1525073 AGAATGGCACCGCGGGGAATCTTGGCACCGAGCCTTCGGAACT---TCTCGGGAGTCTTG 1525129 Query 11882 AGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCCCCTCAACATC 11937 || || |||| ||| | ||| | |||||| |||| || ||| | ||||| Sbjct 1525130 AGGAAGCTGACAAACTCCATGATTTCCACCTTGGCCTCGTCCATGCCCGCGACATC 1525185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030618329600