Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq11 232 8e-56 seq99 123 3e-23 >seq11 Length=1169955 Score = 232 bits (256), Expect = 8e-56 Identities = 1148/1807 (64%), Gaps = 33/1807 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| ||| ||| ||||| | ||| | |||||||| || ||||| || | Sbjct 976219 TGAACTGAATAGGTGCCGCTGCGGCCTGGGTTCGCAAATAGTACATGCCAGTCTTCAGAC 976278 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 | |||||||| || | ||||| | | ||| | | || || || ||| Sbjct 976279 CAAGCTTCCAGCCAGTGAAGTGCATGCTCGTGATCTTCCCCATAGAAGG-CTCTCGCATA 976337 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || |||| | || || |||||||||||| |||||||| || ||||| | | Sbjct 976338 TGGATATTCAGAGACTGTGACTGATCGATGAAGGCACCCCGATCGGCAGCCATCTGGA-- 976395 Query 117984 ACATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 || | | || | |||||||| || ||| ||||||| ||| ||||| || || Sbjct 976396 -CAACGGTACGCTGGGAGATTTCCCAGACGGTCTTGTAGAGCGCCTTGATATCCTCGGGA 976454 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100 || |||||| || || || ||||| | || ||| ||| |||||| | Sbjct 976455 ATGCTTGGGATATTCTGAATAGAGCCACCTTCGGCGATGATGCGATTCTTCATCGAGTCC 976514 Query 118101 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAAC 118157 ||||| || |||| | ||||| |||| || ||||| || || Sbjct 976515 GACCAAAGGCCAAGGTCAACAAGATCGCG---GAGAAGCCAGGGGTTGACGACCTGGAAT 976571 Query 118158 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217 ||||| || | | |||| | || || || | |||||||| |||||||| || ||| Sbjct 976572 TCACCTGCCAAGACACGTCGTTGGTAAATGTTCGAGGTGTATGGTTCAAAGCATTCGTTG 976631 Query 118218 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277 || || | ||||| | ||| || ||||||||||| |||| | ||||||||||||| Sbjct 976632 TTCCCGAGAATTTGAGAGGTGCTTGCAGTGGGCATGGGGGCCAACAAAAGGCTGTTACGG 976691 Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 118337 | || | | | | || | ||||| ||||| ||||||| | | | | || Sbjct 976692 ACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCCCAGTTCCACAAGTCCGAGGGCTTG 976751 Query 118338 CCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCA 118397 | | |||||| || ||||||| || ||||| || | || || ||||| | ||| | Sbjct 976752 ACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGAACCCTCGTACGTCGAA 976811 Query 118398 TATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTT 118457 || ||||||| ||| || | || ||| || || || ||||| || ||||| Sbjct 976812 TAGGGGCCCTGCTCCTTGGCGATCTCCATTGACGCTTCCAGAGCGGCGTGGTAGATTGTC 976871 Query 118458 TCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA 118516 || || || || ||| | |||| ||||||| ||| || || | | || Sbjct 976872 TCGAAGATTTGAATATTGAGCTGCCG-GGCCTCGGGGGATTCGAAGGGCATACGCAGGGC 976930 Query 118517 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 118576 || || ||||||| | ||||| ||||| | ||||| || || || | |||||| Sbjct 976931 AAGGAAGGCATCCGCCAATCCTTGCACACCCACACCAATGGGCCGGTGGCGCATATTGCT 976990 Query 118577 CTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 118636 || || || || ||| || || |||| ||| || | | |||| |||||| Sbjct 976991 GTTGCGGGCCTCCTGCACCGGGTAGTAATTGACATCAATGATCTTATTGAGATTTCGAAC 977050 Query 118637 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC 118696 ||| ||||| || | ||| || || || || | || | || | | | | ||| Sbjct 977051 GACGACCTTGGTTACTTCGTGGAGTTTCTCAAAGTCGTACTCGCCCTTGTTGTAGTCGAC 977110 Query 118697 ATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTA 118756 || || | ||| | || |||| || || || | |||||| | | | ||| Sbjct 977111 GAACGAGGGCAAGGCAAGCGATGCCAAGTTGCAAACCGCCACTTCATCCGGAGCCGAGTA 977170 Query 118757 CTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGA 118816 ||| || || || ||||| | || || || || ||||| | ||||||||| || Sbjct 977171 CTCGATGATCTCGGTGCAGAGATTGGAGCTGCGGATAGTGCCAAGGTTCTTTTGGTTGCT 977230 Query 118817 CTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTT 118876 ||| ||| || ||||||||||||||| | || | || || || || || | || Sbjct 977231 CTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAAAGGATTTCCTGTTTCGGTCTGAGCCTC 977290 Query 118877 GAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTC 118936 | || || | ||||| | ||| | ||| | | || || || | ||| Sbjct 977291 CAAGATGGCGTACCAGAGCTTTTGAGCCTTGAGAGTCTTGCGACCGCGGCCTTCCTTCTC 977350 Query 118937 GTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT 118996 |||||| || | ||| || ||||| ||||| | || | || || || || || Sbjct 977351 ATACTTTTCATACAAGGCCTCGAACTCCTCACCATAGCAATCGGCAAGGCCGGG-GCATT 977409 Query 118997 ATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTG 119055 |||| || | || | ||| | || || ||||| ||||||||||| || || | Sbjct 977410 CGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGG 977469 Query 119056 GGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGAC 119115 | ||||||||||| |||||||||||| ||| | ||||| | || || || | Sbjct 977470 GAATCCAGAGCGCGAGGAAGAGATCCCGGGCTCGAACCTCTTCTTTGCCGTGGTTCTTGC 977529 Query 119116 GCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACC 119175 | | ||||| || || | | ||| |||||||| ||||| ||||| | || | | | Sbjct 977530 GAAGGTCCAAGAACTCGAATACATCTGCGTGCCATGGTTCAAGGTAGATGGCAAAGGCTC 977589 Query 119176 CCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCA 119232 || || | |||| | |||| || ||||| || ||| ||| || |||||||||| Sbjct 977590 CCGGGCGCTTATTACCACCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCA 977649 Query 119233 TTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGA--ATACGAGACTTATTGGCTCT 119290 | ||||| || || | ||| |||||||||||| | ||| ||| || |||| | Sbjct 977650 TGGGAATAATGCCGTTGGACGTTCCATTTGTCCCCGCAATATATGAGCCT--GTGGCGC- 977706 Query 119291 GACATCG-TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCG 119349 || || ||||||| | || || || || ||| |||||||| ||||| | Sbjct 977707 GAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGCATGTCT 977766 Query 119350 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 119409 | | || | || || || || || ||| |||| | ||| ||||||||| | Sbjct 977767 TCAACGTGTCATAAATTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGCATGAAG 977826 Query 119410 ACATTTGAGGCCT-GGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATA 119468 ||| || ||| | ||| || || ||||| |||||||| |||| || || ||| | | Sbjct 977827 ACAGCTG-GGCTTGGGGGGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGAGTGA--AGA 977883 Query 119469 CCTTGG--GACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATAC 119526 |||| ||||| | ||| ||||| | || || ||| || || ||||| Sbjct 977884 ATTTGGACGACATTAGATTGTACGTCTCAATCACACGCTCAACGTCATCGCCCCAAATAC 977943 Query 119527 CGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCT 119586 ||| | ||| ||||||| ||||| || ||| || | | | |||||||| || Sbjct 977944 CGACGGCGACACGCATAATCATGTGCTGAGGTCGCTCGACAATCTTCCCATCGAGTTTCA 978003 Query 119587 GGAGGTA 119593 ||||||| Sbjct 978004 GGAGGTA 978010 >seq99 Length=2343619 Score = 123 bits (136), Expect = 3e-23 Identities = 304/452 (67%), Gaps = 8/452 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| || | | ||| |||||||| Sbjct 2127295 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATG 2127236 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACT-CCAATCTGTTTGAGGAGAC 129845 || || || ||||| | || | | || | || || | || | ||| || | Sbjct 2127235 AAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCT--CATTTCCGAGGGCGACGAGCAGCC 2127178 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 || | |||| |||||||||||| ||| | | |||||| |||| ||| || Sbjct 2127177 TGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGCAGGGCAC 2127118 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | ||||| || || || |||| ||| ||| || | || || || | |||| | | Sbjct 2127117 AGGGGAGGGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGCATCAGTAATGATGTCCT 2127058 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTC-CACGGCAAACTC 130023 ||| || | || | || | | || | || ||| || |||| | || || Sbjct 2127057 TGATGAGCTGCTTGTCGGGGCGGT-GCTTGAGGTGGGAGAACAGGAGGCACG-CGAAGTC 2127000 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||||||||||||||||||||||||||| ||||| |||||| ||||| ||||| || Sbjct 2126999 GGTGTGGAGACCCTCGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATAAG 2126940 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || |||||||| | ||||||||| | || | || ||||||||| ||||| || Sbjct 2126939 GCCGCGCTTCTTGAGCCAGAAAATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGAC 2126880 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| ||| |||| ||| |||| Sbjct 2126879 GGCAGCGAAGGCAACGAGGCGCTGAGCGAAGG 2126848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433839442560