Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq121 174 5e-38
seq11 161 3e-34
seq99 96.9 1e-14
>seq121
Length=2448542
Score = 174 bits (192), Expect = 5e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| ||||| | | || || || ||||| || ||||| || ||||| || |||||
Sbjct 310771 CATACCTCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 310712
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || |||||||| ||||| || ||||||||||| ||||||||||| || ||
Sbjct 310711 AGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGG 310652
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || ||||||||||| || | || || || || || | || |||| |||
Sbjct 310651 AGGGATGCCCTCCTTATCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTC 310592
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| || |||| ||||| || || || || || || |||||||||||
Sbjct 310591 AACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541
Score = 158 bits (174), Expect = 4e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || || ||||| || || ||||| || || ||||| ||||||||
Sbjct 310995 CCACCACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAA 310936
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| || || || || ||||| || || || ||||| || ||||| |||||||| || |||
Sbjct 310935 AGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGA 310876
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
||||| || || |||||||| || | || ||||| || || | ||| || | ||||||
Sbjct 310875 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACT 310816
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| |||| || || ||||| || || || ||||| ||||||||
Sbjct 310815 TCAAGCGTAATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769
Score = 127 bits (140), Expect = 6e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | |||||||| ||||| || || || || |||||||| |||||
Sbjct 310233 CATACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC 310174
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | ||||| || || ||||| || |||||||| || || || || || || || ||
Sbjct 310173 AGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGG 310114
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || ||||| || || | || ||||| || || | |||||| | ||
Sbjct 310113 GGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTC 310054
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721
|| || || || | ||||| ||||| | | |||
Sbjct 310053 GACCTCGAGGGTGATGGTCTTGCCGGTGACTATTT 310019
Score = 107 bits (118), Expect = 6e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| || || ||||| || || ||||| || ||
Sbjct 310543 CATACCACCACGAAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTC 310484
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || || || || || || || || | ||||| || |||||
Sbjct 310483 GGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 310424
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| || || | || ||||| || || | || || | ||
Sbjct 310423 AGGAATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTC 310364
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
||| || || || | ||||| ||||| || || || ||
Sbjct 310363 AACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 310325
>seq11
Length=1169955
Score = 161 bits (178), Expect = 3e-34
Identities = 462/708 (65%), Gaps = 2/708 (0%)
Strand=Plus/Plus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
|| || || || || || ||||| || || ||| | |||||| || || || || ||
Sbjct 608994 GCCGTCATCACGGTCCCCGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACGCC 609053
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| |||||| || | || ||||| | || || || |||||||| || || || ||
Sbjct 609054 GGTCTCATTGCCGGTCTCAACGTTCTCCGTATCATCAACGAACCCACCGCCGCTGCCATC 609113
Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789
|| || || || || || | | || || || | || ||||| ||| | |||
Sbjct 609114 GCCTACGGCCTCGACAAGAAGCACGAGGGTGAGCGCAACGTCCTCATTTTCGATCTTGGT 609173
Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849
||||||||||| ||||| || || || || |||| || || || ||||| || || ||
Sbjct 609174 GGTGGTACTTTCGATGTCTCCCTCCTCACCATTGAGGATGGTATCTTTGAGGTCAAGGCT 609233
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
|| ||||||||||| || |||||||| |||||| | || || || || || ||| ||
Sbjct 609234 ACCGCTGGTGATACTCACCTTGGTGGTGAAGATATGGACAACCGCCTGGTGCAGCACTTC 609293
Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968
| || || || ||||| ||||| || | ||| || || | | || | ||
Sbjct 609294 ATCAACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTTCCTCCAACGCCCGTGCGCTCCG 609352
Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028
||||| | || || ||||| ||||| ||||| || | || || || |||| |||||
Sbjct 609353 CCGCCTCCGCACCGCTTGTGAGCGTGCCAAGCGAACCCTCTCTTCGTCTGCCCAGACCTC 609412
Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088
|| || || || ||||| || |||| ||||||| | || || || ||||| ||
Sbjct 609413 CATCGAGATCGACTCTCTCTTCGAGGGCATCGATTTCTACACCTCCATCACCCGTGCCCG 609472
Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148
|| || || | || ||| || || || | || | | || || || || |
Sbjct 609473 TTTCGAGGAGCTCTGCCAGGACCTCTTCCGATCCACCCTTCAGCCCGTCGACCGCGTCCT 609532
Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208
|| || || || ||| ||| | | || | || | || ||||| || ||
Sbjct 609533 CGCCGACGCCAAGATCGACAAGTCCCAGGTCCACGACATCGTCCTCGTCGGTGGCTCCAC 609592
Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268
||||| || || || || | | || || | || || ||||| ||||| |
Sbjct 609593 CCGTATCCCCCGTGTCCAGAAGCTCATCTCGGACTACTTCAACGGCAAGGAACCCAACAA 609652
Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316
|| || || || ||||| |||||||| || |||||||| || |||||
Sbjct 609653 GTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGC 609700
>seq99
Length=2343619
Score = 96.9 bits (106), Expect = 1e-14
Identities = 105/139 (76%), Gaps = 3/139 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
||||| ||||| |||||| ||| || || | ||||||||||| ||||| || ||
Sbjct 179531 CGTGGAACACCCAATGTAACGTTC---TTGGACGATACACCAGCAAAATGGAACGTGTTG 179475
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||| | ||||||||||| ||||| ||||| | ||| |||||||||||
Sbjct 179474 AGCGTCATCTGAGTGGCAGGCTCACCAATGGACTGGGCTGCCAAAACACCAACCATTTCG 179415
Query 377578 CCAGGATTGACAATAGCCT 377596
||||| || || | ||||
Sbjct 179414 CCAGGGTTCACGAATGCCT 179396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515250983101328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |