Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq121 174 5e-38 seq11 161 3e-34 seq99 96.9 1e-14 >seq121 Length=2448542 Score = 174 bits (192), Expect = 5e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || ||||| || ||||| || ||||| || ||||| Sbjct 310771 CATACCTCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 310712 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || |||||||| ||||| || ||||||||||| ||||||||||| || || Sbjct 310711 AGAAAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGG 310652 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||||||||| || | || || || || || | || |||| ||| Sbjct 310651 AGGGATGCCCTCCTTATCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTC 310592 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || |||| ||||| || || || || || || ||||||||||| Sbjct 310591 AACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541 Score = 158 bits (174), Expect = 4e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || ||||| || || ||||| || || ||||| |||||||| Sbjct 310995 CCACCACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAA 310936 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || || || ||||| || || || ||||| || ||||| |||||||| || ||| Sbjct 310935 AGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGA 310876 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||| || || |||||||| || | || ||||| || || | ||| || | |||||| Sbjct 310875 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACT 310816 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| |||| || || ||||| || || || ||||| |||||||| Sbjct 310815 TCAAGCGTAATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769 Score = 127 bits (140), Expect = 6e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | |||||||| ||||| || || || || |||||||| ||||| Sbjct 310233 CATACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATC 310174 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | ||||| || || ||||| || |||||||| || || || || || || || || Sbjct 310173 AGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGG 310114 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || ||||| || || | |||||| | || Sbjct 310113 GGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTC 310054 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTT 140721 || || || || | ||||| ||||| | | ||| Sbjct 310053 GACCTCGAGGGTGATGGTCTTGCCGGTGACTATTT 310019 Score = 107 bits (118), Expect = 6e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || ||||| || || ||||| || || Sbjct 310543 CATACCACCACGAAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTC 310484 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || || || || | ||||| || ||||| Sbjct 310483 GGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGG 310424 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 310423 AGGAATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTC 310364 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||| ||||| || || || || Sbjct 310363 AACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 310325 >seq11 Length=1169955 Score = 161 bits (178), Expect = 3e-34 Identities = 462/708 (65%), Gaps = 2/708 (0%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || ||||| || || ||| | |||||| || || || || || Sbjct 608994 GCCGTCATCACGGTCCCCGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACGCC 609053 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || ||||| | || || || |||||||| || || || || Sbjct 609054 GGTCTCATTGCCGGTCTCAACGTTCTCCGTATCATCAACGAACCCACCGCCGCTGCCATC 609113 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || | | || || || | || ||||| ||| | ||| Sbjct 609114 GCCTACGGCCTCGACAAGAAGCACGAGGGTGAGCGCAACGTCCTCATTTTCGATCTTGGT 609173 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || |||| || || || ||||| || || || Sbjct 609174 GGTGGTACTTTCGATGTCTCCCTCCTCACCATTGAGGATGGTATCTTTGAGGTCAAGGCT 609233 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || ||||||||||| || |||||||| |||||| | || || || || || ||| || Sbjct 609234 ACCGCTGGTGATACTCACCTTGGTGGTGAAGATATGGACAACCGCCTGGTGCAGCACTTC 609293 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 | || || || ||||| ||||| || | ||| || || | | || | || Sbjct 609294 ATCAACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTTCCTCCAACGCCCGTGCGCTCCG 609352 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 ||||| | || || ||||| ||||| ||||| || | || || || |||| ||||| Sbjct 609353 CCGCCTCCGCACCGCTTGTGAGCGTGCCAAGCGAACCCTCTCTTCGTCTGCCCAGACCTC 609412 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 || || || || ||||| || |||| ||||||| | || || || ||||| || Sbjct 609413 CATCGAGATCGACTCTCTCTTCGAGGGCATCGATTTCTACACCTCCATCACCCGTGCCCG 609472 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 || || || | || ||| || || || | || | | || || || || | Sbjct 609473 TTTCGAGGAGCTCTGCCAGGACCTCTTCCGATCCACCCTTCAGCCCGTCGACCGCGTCCT 609532 Query 350149 AAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTAC 350208 || || || || ||| ||| | | || | || | || ||||| || || Sbjct 609533 CGCCGACGCCAAGATCGACAAGTCCCAGGTCCACGACATCGTCCTCGTCGGTGGCTCCAC 609592 Query 350209 ACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAG 350268 ||||| || || || || | | || || | || || ||||| ||||| | Sbjct 609593 CCGTATCCCCCGTGTCCAGAAGCTCATCTCGGACTACTTCAACGGCAAGGAACCCAACAA 609652 Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 || || || || ||||| |||||||| || |||||||| || ||||| Sbjct 609653 GTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGC 609700 >seq99 Length=2343619 Score = 96.9 bits (106), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| ||||| |||||| ||| || || | ||||||||||| ||||| || || Sbjct 179531 CGTGGAACACCCAATGTAACGTTC---TTGGACGATACACCAGCAAAATGGAACGTGTTG 179475 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||| | ||||||||||| ||||| ||||| | ||| ||||||||||| Sbjct 179474 AGCGTCATCTGAGTGGCAGGCTCACCAATGGACTGGGCTGCCAAAACACCAACCATTTCG 179415 Query 377578 CCAGGATTGACAATAGCCT 377596 ||||| || || | |||| Sbjct 179414 CCAGGGTTCACGAATGCCT 179396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515250983101328