Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq11 176 5e-39 seq99 89.7 6e-13 seq90 84.2 2e-11 >seq11 Length=1169955 Score = 176 bits (194), Expect = 5e-39 Identities = 398/592 (67%), Gaps = 10/592 (2%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| |||||| | ||||| || || ||| |||||| |||||||||| | Sbjct 977959 ATGCGTGTCGCCGTCGGTATTTGGGGCGATGACGTTGAGCGTGTGATTGAGACGTACAAT 977900 Query 53255 TTAATGA-GCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 ||||| | | ||| | ||| || || || | || || || || ||||| || || Sbjct 977899 CTAATGTCGTCCAAATT-CTTCACTCATGCTTCACCCACTCTCTTTAACGCCGGCACCCC 977841 Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373 || | ||| |||| |||||||| || | ||||||||||| || || || || Sbjct 977840 CCAAGCCCAGCTGTCTTCATGCTTCCTCGTCGACATGAAGGATGATAGTATTGAGGGAAT 977781 Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433 || || ||| | ||| || || ||||| || | | ||||| ||||| || | Sbjct 977780 TTATGACACGTTGAAGACATGCGCAATGATCTCAAAAATGGCCGGTGGCATCGGCCTCAA 977721 Query 53434 CTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCCG 53489 | | ||| | | || || | ||| || || |||||| || || |||| | Sbjct 977720 CATCCATCGCA--TTCGCGCCACAGGCTCATATATTGCGGGGACAAATGGAACGTC--CA 977665 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || || | || ||||| || |||||||||||||| ||| ||||||| |||| |||| Sbjct 977664 ACGGCATTATTCCCATGCTTCGTGTCTTCAACAACACCGCCAGGTACGTTGACCAAGGTG 977605 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 || |||||| ||| | || ||||||||||| || || |||||||| || | | | Sbjct 977604 GTAATAAGCGCCCGGGAGCCTTTGCCATCTACCTTGAACCATGGCACGCAGATGTATTCG 977545 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669 |||| | || || || ||| || || | |||||| | || ||| || || || Sbjct 977544 AGTTCTTGGACCTTCGCAAGAACCACGGCAAAGAAGAGGTTCGAGCCCGGGATCTCTTCC 977485 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 || || |||||||| || || |||||| | || || ||| ||| || ||| || Sbjct 977484 TCGCGCTCTGGATTCCCGATCTTTTCATGAAGCGAGTTGAAAAGAACGGCGACTGGACCC 977425 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 |||||||||| ||||| ||||||||||| | | ||| ||||||||||| Sbjct 977424 TGATGTGCCCCAACGAATGCCCCGGCCTTGCCGATTGCTATGGTGAGGAGTT 977373 >seq99 Length=2343619 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 ||||| || || | ||| ||||||||||| || |||||||| | ||| || |||| | Sbjct 2126968 TCATTGGAGAAGGTAAGACCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAAATGGAGGCG 2126909 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 |||| ||| ||||||||||| || ||||| || ||||| || ||||| || ||||| Sbjct 2126908 AAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGGCGCTGAGCGAA- 2126850 Query 74910 GGTG 74913 |||| Sbjct 2126849 GGTG 2126846 >seq90 Length=1309559 Score = 84.2 bits (92), Expect = 2e-11 Identities = 233/346 (67%), Gaps = 10/346 (3%) Strand=Plus/Minus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || | ||||||||||| ||||| ||||| || | ||||||||| || Sbjct 703892 GTTGATGAGAAGACCCTTGATGTGACTCCCGTCGTGATCCTGATCCGCCATGATCATAAG 703833 Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGA 152887 | ||||||| || | | | | | || | ||| || | | ||||| | ||||||| Sbjct 703832 ATGACCGTAACGGA-GCCCCTTGGTATCGGTGTAAACATGTTTATGTTTCAAACCGAGGA 703774 Query 152888 TCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAA 152947 || |||| ||| || |||| || | ||| | ||| | | || ||||| |||| Sbjct 703773 ACTGCTTGATGTTCTGAATCTCCTGGTTCTTGGTAATCTGATCTATCGATGCATCTCGAA 703714 Query 152948 CATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGA-ACGCGTTGCGGCCTACAA-CGCT 153005 | ||| || |||||| ||||| || || || |||| ||| || | | | | || ||| Sbjct 703713 CGTTGAGCATCTTTCCTCGGAGCGGGAAGACTCCGATACG-GTCGGGATCGAGAATTGCT 703655 Query 153006 CAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTC 153065 | | || || || || | || |||||||||||||| |||| || | || || | Sbjct 703654 C-GTCCTGCGATGGCCAAACTCTTGGCCGAGTCACCCTCAGTGAGGATCAAAGTGCACTG 703596 Query 153066 GTGAGACCG--ATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 || || ||| | || || ||| ||||||| ||| ||||||||| Sbjct 703595 GT-AG-CCGTTCTTGGTTCCCGCCAAGTTGGCATCGACAAGCTTGG 703552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214796124800