Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq121 208 9e-49 seq11 183 3e-41 seq165 149 7e-31 seq110 132 5e-26 seq99 93.3 5e-14 >seq121 Length=2448542 Score = 208 bits (230), Expect = 9e-49 Identities = 184/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||||||||| || ||||| ||||| |||||||| Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| ||||| | || ||||||||||||||||||||||| || || ||| Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 310888 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || ||||| || ||||| | ||| || || | || || ||| Sbjct 310889 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 310948 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || ||||| ||| | || ||||| ||||| || Sbjct 310949 ATCCAGAAGGAGTCCACGCTCCATCTCGTCCTCCGCCTTCGTGGTGGCCA 310998 Score = 176 bits (194), Expect = 5e-39 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| |||||||||||||| || || || ||||||||||| || | ||| | Sbjct 310325 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGAC 310384 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || |||||||||||||| |||||||| ||||| || || | ||| Sbjct 310385 AATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATT 310444 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| |||||||||| || ||||| | ||||| ||| |||| ||||| Sbjct 310445 TTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAG 310504 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || ||||| ||| | |||||||| ||||| Sbjct 310505 TCCACGCTCCATCTGGTCCTCCGTCTTCGTGGTGG 310539 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| ||||| |||||||| ||||| || || ||||| ||| Sbjct 310541 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 310600 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || |||||||| |||||||| || ||||| |||||| Sbjct 310601 GACACCATCGACAACGTTAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCAG 310660 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||||||||||||||| || |||| || ||||| | || || || Sbjct 310661 CAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAAC 310720 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| ||||| || ||| | ||||| || || || Sbjct 310721 ATTCAGAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTCCGTGGAGG 310767 Score = 145 bits (160), Expect = 9e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| ||||| ||| | ||| | ||| | Sbjct 310027 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 310086 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || || || ||||| ||||| || ||||| ||||| ||| Sbjct 310087 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAAAG 310146 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | || ||||| | || || ||| | || ||||||||||| ||||| Sbjct 310147 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTCAC 310206 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || ||||| ||||| Sbjct 310207 CTTGTTCTCCGCCTTCGTGGTGG 310229 >seq11 Length=1169955 Score = 183 bits (202), Expect = 3e-41 Identities = 878/1380 (64%), Gaps = 38/1380 (3%) Strand=Plus/Plus Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||| || ||||| |||||||| ||||| || |||| ||||| || || ||||| Sbjct 976608 GTGTATGGTTCAAAGCATTCGTTGTTCCCGAGAATTTGAGAGGTGCTTGCAGTGGGCATG 976667 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514 ||| | | ||| || || || | ||| |||| |||||| | ||| || | | | Sbjct 976668 GGGGCCAACAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCC 976727 Query 80515 CAAAAATCAAC----CCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCC 80568 || || || || | ||| |||| ||||||||||| ||| | || || | Sbjct 976728 CAGT--TCCACAAGTCCGAGGGCT-TGACATTCCACATGTCGTACTGGAGAATTCCTTGA 976784 Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628 || | ||||| ||| || ||||| || ||||||| | |||||| | ||| ||| Sbjct 976785 GAGACGGGAGAACCCTCGTACGTCGAATAGGGGCCCTGCTCCTTGGCGATCTCCATTGAC 976844 Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688 | || || ||||| || || ||| |||| | || | || |||| Sbjct 976845 GCTTCCAGAGCGGCGTGGTAGATTGTCTCGAAGATTTGAATATTGAGCTGCCGGGCCTCG 976904 Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748 ||| ||||| | || | || | ||| | || |||| || || || || | Sbjct 976905 GGGGATTCGAAGGGCATACGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACACCCACA 976964 Query 80749 GCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATT 80807 | || || ||||||||| | || | | || ||||||| | | ||||| | || Sbjct 976965 CCAATGGGCCGGTGGCGCATATTGCTGTTGCG-GGCCTCCTGCACCGGGTAGTAATTGAC 977023 Query 80808 ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAA 80867 ||| |||| || || || || || ||| || || || || ||||||| ||| Sbjct 977024 ATCAATGATCTTATTGAGATTTCGAACGACGACCTTGGTTACTTCGTGGAGTTTCTCAAA 977083 Query 80868 GTCGAATTGGTTCCCCT-------TC-ACAAATGCCGG-AAGGCTCAGGGACGCCAGATT 80918 |||| | | | ||| | || || || | || ||||| || || |||| || Sbjct 977084 GTCGTACTCG--CCCTTGTTGTAGTCGACGAACGAGGGCAAGGCA-AGCGATGCCAAGTT 977140 Query 80919 GCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGA 80978 ||| || ||||| || || | | | | |||||| ||| || ||||| | ||| || Sbjct 977141 GCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGGTGCAGAGATTGGAGCT 977200 Query 80979 CTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACAT 81038 || || || ||||| || ||||| |||| |||||| ||||||||| ||| Sbjct 977201 GCGGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCAT 977260 Query 81039 GTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTT 81098 | | || | || || ||| ||| | || | |||||||| ||| | || | ||||| Sbjct 977261 GAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATGGCGTACCAGAGCTTTTGAGCCTT 977320 Query 81099 GACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGC 81158 || |||||| |||||| | ||||||| | || | ||||||| | Sbjct 977321 GAGAGTCTTGCGACCGCGGCCTTCCTTCTCATACTTTTCATACAAGGCCTCGAACTCCTC 977380 Query 81159 ACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218 ||| | || | ||| | ||||| ||||| |||||||||||| ||||||| || Sbjct 977381 ACCATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTT 977440 Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278 || || || |||||||||| || || |||||||| ||| ||| || || ||| Sbjct 977441 CTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGC 977500 Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338 || |||| || | || ||||| ||| | || | || || | | || || || Sbjct 977501 TCGAACCTCTTCTTTGCCGTGGTTCTTGCGAAGGTCCAAGAACTCGAATACATCTGCGTG 977560 Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395 |||||| || || || | ||| | | ||| ||| | ||||| |||| ||||| Sbjct 977561 CCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGTA 977620 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455 | ||| || ||| || ||||| | ||| || || || || | ||| || || || Sbjct 977621 CCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGACGTTCCATTTGT 977680 Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGA----AAGACCGATGCCAC 81511 ||| | ||| || || ||||||| | ||| ||| || || |||||||||| Sbjct 977681 CCCCGCAATATATGAGCCTGTGGCGCGAA---TGC-GATGGATGTTGAGGCCGATGCCAC 977736 Query 81512 CTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTAT 81571 | | | ||||| ||| || || |||| || |||||||||||||| || |||| Sbjct 977737 CGGCCATTTTTGAGATCATTGCGCATGTCTTCAACGTGTCATAAATTCCCTCAATACTAT 977796 Query 81572 CTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT--TTTGAGCCGGCATT 81629 | | |||||||| | | ||| || |||| || |||||| | |||||| || Sbjct 977797 CATCCTTCATGTCGACGAGGAAGCATGAAGACAGCT--GGGCTTGGGGGGTGCCGGCGTT 977854 Query 81630 GAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTT 81689 || || || || | || ||| |||| | | ||||| || | || || || | Sbjct 977855 AAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAAT 977914 Query 81690 GACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 || || || || || || |||||||| || |||||||||| ||||| ||| || Sbjct 977915 CACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATAATCATGTGCTGAGG 977974 >seq165 Length=1469810 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || || ||||| ||||| Sbjct 93640 ATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 93581 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||| || || || ||||| Sbjct 93580 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAA 93521 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 93520 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTACAAC 93461 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | |||||||| || || Sbjct 93460 ATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 93414 >seq110 Length=3171699 Score = 132 bits (146), Expect = 5e-26 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| || || |||||||| ||||| || | || Sbjct 54410 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 54469 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| ||||| | || |||||||||||||||||||| ||||| || || |||||||| Sbjct 54470 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCTT 54529 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| || || ||||| |||||||||| || ||||| | || || ||| | || ||| Sbjct 54530 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 54589 Query 27595 G 27595 | Sbjct 54590 G 54590 >seq99 Length=2343619 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 64713 TCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTC 64772 |||||| |||| || || || || || || || ||||| || | ||| || Sbjct 2126855 TCAGCGCCTCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTC 2126914 Query 64773 TATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832 ||||||||||| || ||||| ||||| ||||| ||||| | || || || ||||| || Sbjct 2126915 CATTTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCAT 2126974 Query 64833 CTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGA 64892 ||| || |||||||| |||||| || || ||| ||||||| |||||||||| | Sbjct 2126975 CTCCCGTGACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCA 2127034 Query 64893 C 64893 | Sbjct 2127035 C 2127035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309145317120