Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq121 114 1e-20
seq165 102 7e-17
seq110 84.2 2e-11
>seq121
Length=2448542
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || |||||| | ||||| || ||||| ||| | ||
Sbjct 310541 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 310600
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || ||||| || || || ||||| || ||||| ||
Sbjct 310601 GACACCATCGACAACGTTAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCAG 310660
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||| ||||||| | ||| |||| |||||||||
Sbjct 310661 CAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAAC 310720
Query 27168 ATTCAAAAGGAGTCGACC 27185
||||| |||||||| |||
Sbjct 310721 ATTCAGAAGGAGTCCACC 310738
>seq165
Length=1469810
Score = 102 bits (112), Expect = 7e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || || || || || |||||| | || || || || || || | ||
Sbjct 93641 CATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 93582
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| |||| || | ||||| || || || ||||| || ||||| || ||||| ||
Sbjct 93581 GGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 93522
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||||||||| || | || ||| | ||| | || || |||||
Sbjct 93521 ACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTACAA 93462
Query 27167 CATTCAAAAGGAGTCGACC 27185
||| || ||||||||||||
Sbjct 93461 CATCCAGAAGGAGTCGACC 93443
>seq110
Length=3171699
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || || ||| | || || ||||| || || | || ||| ||||
Sbjct 54410 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 54469
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | || || || ||||| ||||| || || || || ||||||||||||||| |
Sbjct 54470 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCTT 54529
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | |||||| || || | || || | ||| |||| |||||||| ||||| |||
Sbjct 54530 ATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAG 54589
Query 27177 G 27177
|
Sbjct 54590 G 54590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917443179520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |