Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq121 185 2e-41
seq165 167 5e-36
seq110 138 3e-27
>seq121
Length=2448542
Score = 185 bits (204), Expect = 2e-41
Identities = 176/225 (78%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||| |||||||| |||||||| || || ||||| ||||| | |||
Sbjct 310765 TCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAG 310706
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | ||||||||||| ||||| || || |||||||| ||||| ||||| ||||| |
Sbjct 310705 GGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGAT 310646
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||| ||||| ||||| || ||||| ||||||||||| || |||||| ||
Sbjct 310645 GCCCTCCTTATCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTCAACTTC 310586
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| || || |||||||| || || | ||||||
Sbjct 310585 GAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541
Score = 167 bits (184), Expect = 5e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| || || || |||||||| || ||||| || || || | |||||
Sbjct 310534 ACGAAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGT 310475
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| ||||| || | ||||||||||||||||||| ||
Sbjct 310474 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACC 310415
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||||||||| || |||||||||||
Sbjct 310414 CTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACCTCGAG 310355
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
||||| ||||| || || || ||||| ||
Sbjct 310354 GGTGATGGTCTTGCCGGTAAGGGTCTTGAC 310325
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || ||||||||||| ||||| || || || || || ||||| | ||||||
Sbjct 310224 ACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGT 310165
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || ||||| || ||||| |||||||| || || | ||
Sbjct 310164 TCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCC 310105
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || |||||||| |||||| || ||||||||
Sbjct 310104 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAG 310045
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
||||| ||||| || ||||
Sbjct 310044 GGTGATGGTCTTGCCGGTGA 310025
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| || || || |||||||| || ||||| || ||||| | ||| ||
Sbjct 310990 ACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGT 310931
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||| || || || || || || || || || |||| |||
Sbjct 310930 GCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCC 310871
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||| ||||| ||||| || |||||||| || || ||||| || ||
Sbjct 310870 CTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAG 310811
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || || || ||||| ||||| | ||||||
Sbjct 310810 CGTAATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769
>seq165
Length=1469810
Score = 167 bits (184), Expect = 5e-36
Identities = 172/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| || || ||||| || |||||||| || || | |||||
Sbjct 93419 ACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 93478
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||| |||||||| ||||| |||||||| || || | ||
Sbjct 93479 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCC 93538
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||| ||||| ||| || ||||||||
Sbjct 93539 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAG 93598
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| ||||| ||||| || ||||| || || | ||||| ||
Sbjct 93599 GGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 93643
>seq110
Length=3171699
Score = 138 bits (152), Expect = 3e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| || || || ||||| | |||||| | ||||| || |||||||| || ||||| |||
Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 54529
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || ||||| || ||||| | ||| ||||||||||| ||||| ||||| || |||
Sbjct 54528 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 54469
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| ||| || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 54468 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 54410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149386112240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |