Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq121 102 6e-17
>seq121
Length=2448542
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || || || || || ||||| || ||||||||||| || ||
Sbjct 310541 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 310600
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || |||| | || ||| || || || || | || || || ||
Sbjct 310601 GACACCATCGACAACGTTAAGTC-CAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCA 310659
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| ||| | || ||||| || || ||||||||||| | ||||| | ||||||||
Sbjct 310660 GCAACGTCTTATCTTTGCTGGTAAGCAACTGGAAGATGGCCGCACCCTTTCTGATTACAA 310719
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 310720 CATTCAGAAGGAGTCCAC 310737
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| || || ||||| || || || |||||||| || |
Sbjct 310769 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAAACCATTACGCTTGAAGTTGAGTCTTCC 310828
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || | || | || ||||| || || | || || |||||
Sbjct 310829 GATACCATCGACAATGTGAAGTCGAAGA-TTCAGGACAAGGAGGGAATTCCCCCCGATCA 310887
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || || || |||| |||||| | ||||||||
Sbjct 310888 GCAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAA 310947
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 310948 TATCCAGAAGGAGTCCAC 310965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008874969408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |