Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq121 145 2e-29
seq165 140 8e-28
seq126 125 2e-23
>seq121
Length=2448542
Score = 145 bits (160), Expect = 2e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| || ||||| ||||| || || |||| |||||| |||| | ||
Sbjct 310534 ACGAAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGT 310475
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || ||||| || | |||||||||||| || ||||||||
Sbjct 310474 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACC 310415
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||||||||| || | || || || |
Sbjct 310414 CTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACCTCGAG 310355
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 310354 GGTGATGGTCTTGCCGGT 310337
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || |||||||| || |||||||| || || | ||||||||| | | ||
Sbjct 310224 ACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGT 310165
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| || || || |||||||| |||||||| || || || ||||||||||| || || ||
Sbjct 310164 TCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCC 310105
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| |||||||| || |||| || || || |
Sbjct 310104 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAG 310045
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 310044 GGTGATGGTCTTGCCGGT 310027
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || || | |||||||| | | || | ||||||
Sbjct 310752 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 310693
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||| |||||||| ||||| |||||||| || || || ||||| ||
Sbjct 310692 TCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCC 310633
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||||||||| || | ||| || || | || ||||||
Sbjct 310632 TGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTC 310573
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| || | ||| | |||||
Sbjct 310572 TTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541
>seq165
Length=1469810
Score = 140 bits (154), Expect = 8e-28
Identities = 166/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| |||||||| || || || || |||| ||||| || | | ||
Sbjct 93419 ACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT 93478
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || |||||||| || || ||||||||||| || || ||
Sbjct 93479 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCC 93538
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| ||||| |||| || || || |
Sbjct 93539 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAG 93598
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||||||||| | || || | ||| | |||||| ||
Sbjct 93599 GGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 93643
>seq126
Length=27542
Score = 125 bits (138), Expect = 2e-23
Identities = 202/285 (71%), Gaps = 8/285 (3%)
Strand=Plus/Minus
Query 7436 TGGAAACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTA 7495
|||||| |||||||||||||||| ||||| || | ||||||| ||||||
Sbjct 17035 TGGAAAT-TTATATTTAATATTTGCATTATTTTCAGGGTTATTAGGTACAGCTTTTTCTG 16977
Query 7496 TGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCA 7553
| | ||||| ||||||||| || || ||| ||| | || | || |||| ||
Sbjct 16976 TTTTAATAAGATTAGAATTAAGTGGACCTGGTGTACAATACATATCAGA--TAAT---CA 16922
Query 7554 ACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCC 7613
| | || || ||| ||||| || ||||| | | ||||| |||||| | ||||||||
Sbjct 16921 ATTATATAATAGTATAATTACAGCTCATGCTATATTAATGATATTCTTTATGGTTATGCC 16862
Query 7614 GGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATAT 7673
| | ||||| || || || |||| || | ||||||||||| || | |||||||||
Sbjct 16861 TGCATTAATAGGTGGATTTGGGAATTTCTTAATGCCTTTAATGATAGGAGGTCCTGATAT 16802
Query 7674 GGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718
||| || || || | || ||||||||||| |||||| |||| ||
Sbjct 16801 GGCATTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCTCC 16757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528510842144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |