Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq110 109 4e-19 >seq110 Length=3171699 Score = 109 bits (120), Expect = 4e-19 Identities = 200/289 (69%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 29531 TGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 29590 || ||||||||||||| || || ||||| || | | | || | |||| || || Sbjct 2236486 TGTGGGTCGTAGCCCTTCACCACAAAGTCCTCAGCTTGCCATCCATCAATGCTC-CCGCC 2236544 Query 29591 CTCCTGTTT----ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCT 29646 || || | | ||| ||||| || ||| | ||||| | ||| | ||| | || Sbjct 2236545 CTTCTCTCTCGTAATCTCGAGTGTTGGGAAGTCGCGAGGCTCGCGCTCTAACTGCAACCG 2236604 Query 29647 CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTC 29705 || | || |||||||| ||||| || || || ||||||| | ||| | ||| | || Sbjct 2236605 CAAGGCATCGACGTGGTCCAGGTACACATGGGCGTCTCCCAAGACGTGCGTGAAAGT-TC 2236663 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 |||| |||| || ||| || || ||||| | || | | | |||||| ||||||| Sbjct 2236664 CCGGGACTAGGTCGCAGACATGCGCAATCATATGTGTCAATAAGGCGTAGCTAGCGATGT 2236723 Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 | ||||| || || || |||||||| | |||||||||||||||||||| Sbjct 2236724 TGAAGGGAACTCCAAGGCCCATGTCGCAAGACCTCTGGTAGAGCTGGCA 2236772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162328779936