Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq121 172 1e-37 seq165 159 7e-34 seq110 129 1e-24 seq106 91.5 3e-13 seq66 91.5 3e-13 seq99 86.0 1e-11 >seq121 Length=2448542 Score = 172 bits (190), Expect = 1e-37 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||||||| | |||| || || ||||| |||||||| | Sbjct 310540 ACCACCACGAAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGA 310481 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| || ||||| |||||||||||| || Sbjct 310480 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGG 310421 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 310420 AATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAAC 310361 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||| ||||| ||||| || || | ||||| |||| Sbjct 310360 CTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGA 310323 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | ||| || || || |||||||| |||| Sbjct 310768 ACCTCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGA 310709 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||||||||| || ||||| || || |||||||| | |||||| ||||| || Sbjct 310708 AAGGGTGCGGCCATCTTCCAGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGG 310649 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || || ||||| | || ||| | ||||| |||||||| | ||| || Sbjct 310648 GATGCCCTCCTTATCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCCGATGATTCAAC 310589 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| || |||||||| || || | |||||| ||||| |||||||| Sbjct 310588 TTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || ||||| | |||| || || ||||| ||||| |||| | Sbjct 310995 CCACCACGAAGGCGGAGGACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAA 310936 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || |||||||| || | ||| || || || ||| Sbjct 310935 AGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGA 310876 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | ||||| || || |||| || ||| Sbjct 310875 ATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACT 310816 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || || || || || | ||||| || || |||||||| Sbjct 310815 TCAAGCGTAATGGTTTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 310769 Score = 125 bits (138), Expect = 1e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||| ||| || || || ||||| |||| Sbjct 310230 ACCACCACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGA 310171 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || || |||| || |||||||| || Sbjct 310170 AAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGG 310111 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| || || || | ||||| Sbjct 310110 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAGAGGACTCGAC 310051 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 310050 CTCGAGGGTGATGGTCTTGCCGGT 310027 >seq165 Length=1469810 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || |||||||||||||||| Sbjct 93413 ACCGCCACGAAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 93472 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||||| || |||||||| || Sbjct 93473 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 93532 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||| | ||||| Sbjct 93533 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 93592 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| ||||| | ||||| ||||| || ||||| || Sbjct 93593 CTCGAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAGATTTGCATGTT 93643 >seq110 Length=3171699 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || || ||||| |||| ||| |||||||||||||| || || || ||||| || || Sbjct 54588 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 54529 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||| || || || ||||||||||| || ||||| | || || | ||| Sbjct 54528 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 54469 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || || ||||| ||||||||||| | ||||| ||||| Sbjct 54468 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 54410 >seq106 Length=260114 Score = 91.5 bits (100), Expect = 3e-13 Identities = 166/237 (70%), Gaps = 17/237 (7%) Strand=Plus/Plus Query 109939 GCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATT-GTGAA 109997 || ||||| |||||||||||| | | |||||||| | | | |||| | | || | ||| Sbjct 250357 GCGACATCCTCAAATTGCGGGGAACTCCTAAAGCTT-TCACTCCAAAGCCGGTTCGCGAA 250415 Query 109998 AGCATCAGCTGGCCGAG--AACAGAACTCGGGTATGGTAAAAATTCATATGATGCCACAA 110055 ||| | | ||||| | ||||| |||||||| | ||||| | ||||| |||| Sbjct 250416 AGCCGCCGGTGGCCAGGTTAACAGC-CTCGGGTACTGGAAAAACGTGGAAGATGCGACAA 250474 Query 110056 TGGGCAATCCGCAGCCAAGCCTCTAAAGG--------AAAATTATTCCCATGAGGAAGGT 110107 ||| ||||||||||||||||| ||||||| | | |||| | ||||||| Sbjct 250475 TGGACAATCCGCAGCCAAGCCCCTAAAGGCTCCCCGTCGAGGGACGCCCACGGGGAAGGT 250534 Query 110108 TCAACGACTAAACGGTGATGGGTCTGGTGCTTA---GCACAGGCTTAAGATATAGTC 110161 ||| |||| ||||| ||||||| | | || | || | |||||||||| |||| Sbjct 250535 TCAGAGACTTAACGGGGATGGGTAT-GCGCCGAGAGGCGCCTGCTTAAGATAAAGTC 250590 >seq66 Length=901868 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| || || | ||| |||| || || | ||| || || |||||||| | || Sbjct 340250 GGGAAGCCCTCGACCTGCTCGTTGTTGATGGCACGCATGAGAGTAGACTTGCCGGAGCCG 340191 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 ||||||||||| |||||||| || | || ||| || | || || | ||| ||| Sbjct 340190 TTGGGGCCGCAGAGACCATAGCGCTGGCCACGCTTGAGGCGGAGACCAGTCTGGTTGAGA 340131 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||||||||| ||||||| || ||||||||| || | || ||||||||||| Sbjct 340130 AGAATCTTAGCACCATAGGCGAGAGAGAACGTGCAGTTGCAGAGGTCCTCGCC 340078 >seq99 Length=2343619 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/179 (71%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286 |||||||||| || | |||||| ||| || || || ||||| || || | | ||| Sbjct 2127127 TCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACAGGCTGCTCG 2127186 Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346 | || || || | ||||| | || | |||| |||||||||| || |||||| || Sbjct 2127187 TCGCCCTCGGAAATGAGAAGATCTACAGGTCCACCAACCCCTTCGACTTCATGGAGAACA 2127246 Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 | || ||| || || || ||||||||||| |||||||| | || || || |||||| Sbjct 2127247 TCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCC 2127305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736839603104