Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq165 125 5e-24 seq121 125 5e-24 seq110 96.9 2e-15 >seq165 Length=1469810 Score = 125 bits (138), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| ||||||||||| || | ||| ||| |||| || Sbjct 93432 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCG 93491 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||||| ||||| || || | || | || ||||| ||| Sbjct 93492 AGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 93551 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | ||| || ||||| | || || |||| Sbjct 93552 ATCTTGGACTTGACATTGT--CGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCT 93609 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| |||||||| ||||||||||||||| Sbjct 93610 TGCCCGTTAGGGTCTTGACGAAGATTTGCATG 93641 >seq121 Length=2448542 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || |||||| |||||| ||||| |||||||| | || ||| |||| || Sbjct 310977 ACGAGATGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCA 310918 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||||||| || | |||||||||||| | || | || ||||| ||| Sbjct 310917 AGCTGCTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGA 310858 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | ||||| |||| || || || || | |||||| || || Sbjct 310857 ATCTTCGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCAAGCGTAATGGTTTTG 310798 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| || ||||| ||||| Sbjct 310797 CCGGTAAGGGTCTTGACAAAGATCTGCAT 310769 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| || ||||||||||| | || ||| | || ||| Sbjct 310749 ACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCC 310690 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | ||| ||||| || | ||| | || ||||| ||| Sbjct 310689 AGTTGCTTACCAGCAAAGATAAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGA 310630 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || ||| | |||||||| | ||||| || || | ||||||||||| Sbjct 310629 ATCTTGGACTT-AACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTT 310571 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||||||||| || ||||| Sbjct 310570 GCCAGTAAGAGTCTTCACGAAAATCTGCAT 310541 >seq110 Length=3171699 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| || || |||||||| | || ||| | || || |||||||| ||||| || | Sbjct 54590 CCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAA 54531 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 | | |||||| ||||| | ||| | || ||||| ||| ||||| ||||| | Sbjct 54530 TAAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 54471 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || ||||| | ||| || ||||| | || || ||||| |||||||||||||| |||| Sbjct 54470 CGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGA 54411 Query 44328 A 44328 | Sbjct 54410 A 54410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989627820592