Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq190 228 8e-55
seq46 145 8e-30
seq24 120 3e-22
>seq190
Length=2042575
Score = 228 bits (252), Expect = 8e-55
Identities = 284/384 (74%), Gaps = 4/384 (1%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| || |||||||| |||| | | |||||| |||||| ||||||
Sbjct 1615410 AGAAGGCCGACTGGGCTCTTCGCTGGATTGCCGACCGCGAGGCCACCTTCGCTCAGCGCC 1615469
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
| || |||||||| ||||||||||| ||||||| || |||||| |||| || |
Sbjct 1615470 TCGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATTTTCT 1615529
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||||||||| |||||||| ||||| || || || ||| ||| |||||||||||| | |
Sbjct 1615530 GGCTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTG 1615589
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
|||||||||| || |||||| || || | |||||| || | ||| || ||
Sbjct 1615590 ACGAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTTCTCCCACCTCAAGCACCGCCCCG 1615649
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
| | || | ||| ||| ||| | || || || ||| ||||||||| |||||||
Sbjct 1615650 ACAAGCAGCTCATCAAGGACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCA 1615709
Query 117282 CCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339
| || || || || |||| ||||| || | || ||||| | ||| ||| |||||
Sbjct 1615710 CTGAGGCCCTCCCCTGTGC-CCTGCTCGGCATGAA-CGCGAACCTCATGAAGCAGTACAT 1615767
Query 117340 CGAGTTCGTCGCCGACAGGCTGCT 117363
|||||||||||||||||||||||
Sbjct 1615768 TGAGTTCGTCGCCGACAGGCTGCT 1615791
Score = 163 bits (180), Expect = 3e-35
Identities = 212/287 (74%), Gaps = 7/287 (2%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||| | ||| ||| | || ||
Sbjct 1614986 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTC 1615045
Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | | | || || ||||| ||||||||
Sbjct 1615046 TCCAAGGATCTCCA-CGACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTCATCTC 1615104
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
|||| | || ||||| ||||||||| ||| || |||||||||||||| || || |||||
Sbjct 1615105 GCACATTCTTGCCTTCTTCGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGTTGAGCG 1615164
Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870
||| || | ||||| ||| | | ||||| || ||||||||||| || |||||| |
Sbjct 1615165 ATTCAGCGC-TGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGA 1615223
Query 116871 TGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||||| | |||||||| | || || |||||| || || |||
Sbjct 1615224 TGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATTGATACCTAC 1615270
>seq46
Length=1231756
Score = 145 bits (160), Expect = 8e-30
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| |||||||| ||||| || || || |||||||| ||||||||| | || ||||| |
Sbjct 616721 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 616662
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| | |||| | | | ||||| || || | ||||| |||||||||||| | ||
Sbjct 616661 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 616602
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||| || || || |||| ||| ||||| ||||| || |||| ||||||||| |||||
Sbjct 616601 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 616542
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||||| | || || || || ||
Sbjct 616541 CAACATCCAGAAGGAGTCGACCCTCCACCTCGT 616509
>seq24
Length=1627699
Score = 120 bits (132), Expect = 3e-22
Identities = 146/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
|||| || || || || ||||| ||||||||| |||| || || | |||||| | |
Sbjct 1128311 TCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCG 1128370
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | | ||| || || | ||||| ||||| || || | ||||| |||||| | |
Sbjct 1128371 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 1128430
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
| | ||| ||||| ||||| || || | ||||||||| ||||||||| ||||||||||
Sbjct 1128431 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 1128490
Query 40880 AGGCCACGCTGCATCTAGT 40898
|| ||||||| ||||| ||
Sbjct 1128491 AGTCCACGCTCCATCTGGT 1128509
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| || || ||| |||| || ||| | |
Sbjct 1128529 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 1128588
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| || || ||||||||||| | || ||
Sbjct 1128589 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCA 1128647
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || |||| || || || |||||||| || | |||||||| || |||||
Sbjct 1128648 GCAACGTCTTATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGATTACAA 1128707
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| ||||||||| |||| || || || ||
Sbjct 1128708 CATTCAGAAGGAGTCCACCCTTCACCTCGT 1128737
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||| ||||| ||||||||| |||| ||||| || | || | | | | | |||||
Sbjct 1128013 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 1128072
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
|| || | ||||| |||||||||||| | ||||| || || || || | ||| || |
Sbjct 1128073 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 1128132
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| ||||| || |||| || ||||| || ||||| || |||||||| |||| || |
Sbjct 1128133 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 1128192
Query 40892 ATCTAGT 40898
| || ||
Sbjct 1128193 ACCTTGT 1128199
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || ||||| || || || |||| || || | ||
Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || |||| ||||| ||||| || ||| | || |||
Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||| | || ||||| ||||| || |||| ||||| || || |||||
Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| ||||||| || || ||
Sbjct 1128937 ATCCAGAAGGAGTCCACGCTCCACCTCGT 1128965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515217841109360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |