Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_002670.1 Length=14510 Score E Sequences producing significant alignments: (Bits) Value seq38 127 2e-25 >seq38 Length=1064 Score = 127 bits (140), Expect = 2e-25 Identities = 149/199 (75%), Gaps = 18/199 (9%) Strand=Plus/Minus Query 13363 TTCGCAAATTGCAAGTCCAAGTTAGCCAGCCA---AGCT--------CATCTCATATGAA 13411 |||||||| ||||||| ||| ||||||| | | || | ||||| || || Sbjct 1064 TTCGCAAAATGCAAGTGCAATTTAGCCA-CTAGATAGATTCAATTAACATCTGATTTGGT 1006 Query 13412 CTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATCCAATACTCGAT---AGCGGCG 13468 |||| |||||||||||||||||||||||| ||||||||| | ||| || ||| || Sbjct 1005 GTCTTGAAGTTGAACATTTTTCTTGGATAATTGTTCATCCAGTTCTCAATGTAAGCCACG 946 Query 13469 ACTTCTTCAGGGGTCGTCTTTGTTGTGCCTTTTGGCAGATGCCTACGAATCATTCGGTTA 13528 |||| || | ||| ||||||| |||||| || | |||||||| ||||||||||| Sbjct 945 ACTTGTTTCGTGGTTTTCTTTGT---GCCTTTAGGTAAGTGCCTACGTATCATTCGGTTG 889 Query 13529 TGGTTTTCATTCGTCCCTC 13547 || |||||||| ||||||| Sbjct 888 TGATTTTCATTTGTCCCTC 870 Score = 125 bits (138), Expect = 7e-25 Identities = 148/198 (75%), Gaps = 18/198 (9%) Strand=Plus/Minus Query 7839 TCGCAAATTGCAAGTCCAAGTTAGCCAGCCA---AGCT--------CATCTCATATGAAC 7887 ||||||| ||||||| ||| ||||||| | | || | ||||| || || Sbjct 1063 TCGCAAAATGCAAGTGCAATTTAGCCA-CTAGATAGATTCAATTAACATCTGATTTGGTG 1005 Query 7888 TCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATCCAATACTCGAT---AGCGGCGA 7944 |||| |||||||||||||||||||||||| ||||||||| | ||| || ||| ||| Sbjct 1004 TCTTGAAGTTGAACATTTTTCTTGGATAATTGTTCATCCAGTTCTCAATGTAAGCCACGA 945 Query 7945 CTTCTTCAGGGGTCGTCTTTGTTGTGCCTTTTGGCAGATGCCTACGAATCATTCGGTTAT 8004 ||| || | ||| ||||||| |||||| || | |||||||| ||||||||||| | Sbjct 944 CTTGTTTCGTGGTTTTCTTTGT---GCCTTTAGGTAAGTGCCTACGTATCATTCGGTTGT 888 Query 8005 GGTTTTCATTCGTCCCTC 8022 | |||||||| ||||||| Sbjct 887 GATTTTCATTTGTCCCTC 870 Score = 87.8 bits (96), Expect = 2e-13 Identities = 216/322 (67%), Gaps = 23/322 (7%) Strand=Plus/Minus Query 14117 TCTTGAGCCTTTTTAGCAGAGTATTTTACCTTCCGCTTGAGCTGGATTTCCCCTCGCTTC 14176 ||||| || |||| || || || ||| ||| ||||| || | | |||||| | Sbjct 306 TCTTGGGCAATTTTCGCTGAATACTTTGTCTTATATTTGAGTTGAACTGTCCCTCGTTGT 247 Query 14177 ATCTCTCTGTCAATCGTCCCATGAGCTTTATTCA----ATAAGCGCGCAATCTCACGGTT 14232 ||||| | | |||||| | | |||||| | ||||||| || || || || Sbjct 246 ATCTCGTTATGAATCGTTTGAGGGGCTTTACCAAGACGATAAGCG----ATTTCTCGATT 191 Query 14233 GCTCAGTCCTTCTTTATTGTGCCAACGTTCAATGTTTAAACGGTCTTGATTGGTCAGGTG 14292 || | | ||| |||||||||||||||||||| | ||| ||| | || | || Sbjct 190 ACTGACTTTTTCCTTATTGTGCCAACGTTCAATAAGGAGACGTTCTGACTCTGTTAAATG 131 Query 14293 TTTCCCTTTGCTCTGGCTTGTGATAGAATAGTCTTGCATC-TGAATTTCCTTTTTATACT 14351 || ||||| || | || ||| || ||||||| |||| ||||| | | Sbjct 130 CTTACCTTT---------TGAGGTATAATTGTTTTGCATCATGAAA--CCTTTCGACTTT 82 Query 14352 ATTTGGTCG-AACTTCTAGTATAAGAGATTCAGA-TGTTTTTTGCTTGACTCAAGGTGGC 14409 ||| | | |||| | ||| ||| | ||||| |||||||| || ||||||||||| Sbjct 81 GTTTTCTAGCAACTACAAGTCTAACAT-TTCAGGGTGTTTTTTCATTCTCTCAAGGTGGC 23 Query 14410 TAACTTCATTTTACAATTTGCG 14431 |||||||||||||||||||||| Sbjct 22 TAACTTCATTTTACAATTTGCG 1 Score = 87.8 bits (96), Expect = 2e-13 Identities = 216/322 (67%), Gaps = 23/322 (7%) Strand=Plus/Minus Query 8592 TCTTGAGCCTTTTTAGCAGAGTATTTTACCTTCCGCTTGAGCTGGATTTCCCCTCGCTTC 8651 ||||| || |||| || || || ||| ||| ||||| || | | |||||| | Sbjct 306 TCTTGGGCAATTTTCGCTGAATACTTTGTCTTATATTTGAGTTGAACTGTCCCTCGTTGT 247 Query 8652 ATCTCTCTGTCAATCGTCCCATGAGCTTTATTCA----ATAAGCGCGCAATCTCACGGTT 8707 ||||| | | |||||| | | |||||| | ||||||| || || || || Sbjct 246 ATCTCGTTATGAATCGTTTGAGGGGCTTTACCAAGACGATAAGCG----ATTTCTCGATT 191 Query 8708 GCTCAGTCCTTCTTTATTGTGCCAACGTTCAATGTTTAAACGGTCTTGATTGGTCAGGTG 8767 || | | ||| |||||||||||||||||||| | ||| ||| | || | || Sbjct 190 ACTGACTTTTTCCTTATTGTGCCAACGTTCAATAAGGAGACGTTCTGACTCTGTTAAATG 131 Query 8768 TTTCCCTTTGCTCTGGCTTGTGATAGAATAGTCTTGCATC-TGAATTTCCTTTTTATACT 8826 || ||||| || | || ||| || ||||||| |||| ||||| | | Sbjct 130 CTTACCTTT---------TGAGGTATAATTGTTTTGCATCATGAAA--CCTTTCGACTTT 82 Query 8827 ATTTGGTCG-AACTTCTAGTATAAGAGATTCAGA-TGTTTTTTGCTTGACTCAAGGTGGC 8884 ||| | | |||| | ||| ||| | ||||| |||||||| || ||||||||||| Sbjct 81 GTTTTCTAGCAACTACAAGTCTAACAT-TTCAGGGTGTTTTTTCATTCTCTCAAGGTGGC 23 Query 8885 TAACTTCATTTTACAATTTGCG 8906 |||||||||||||||||||||| Sbjct 22 TAACTTCATTTTACAATTTGCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46313487009289