Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_002670.1
Length=14510
Score E
Sequences producing significant alignments: (Bits) Value
seq38 127 2e-25
>seq38
Length=1064
Score = 127 bits (140), Expect = 2e-25
Identities = 149/199 (75%), Gaps = 18/199 (9%)
Strand=Plus/Minus
Query 13363 TTCGCAAATTGCAAGTCCAAGTTAGCCAGCCA---AGCT--------CATCTCATATGAA 13411
|||||||| ||||||| ||| ||||||| | | || | ||||| || ||
Sbjct 1064 TTCGCAAAATGCAAGTGCAATTTAGCCA-CTAGATAGATTCAATTAACATCTGATTTGGT 1006
Query 13412 CTCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATCCAATACTCGAT---AGCGGCG 13468
|||| |||||||||||||||||||||||| ||||||||| | ||| || ||| ||
Sbjct 1005 GTCTTGAAGTTGAACATTTTTCTTGGATAATTGTTCATCCAGTTCTCAATGTAAGCCACG 946
Query 13469 ACTTCTTCAGGGGTCGTCTTTGTTGTGCCTTTTGGCAGATGCCTACGAATCATTCGGTTA 13528
|||| || | ||| ||||||| |||||| || | |||||||| |||||||||||
Sbjct 945 ACTTGTTTCGTGGTTTTCTTTGT---GCCTTTAGGTAAGTGCCTACGTATCATTCGGTTG 889
Query 13529 TGGTTTTCATTCGTCCCTC 13547
|| |||||||| |||||||
Sbjct 888 TGATTTTCATTTGTCCCTC 870
Score = 125 bits (138), Expect = 7e-25
Identities = 148/198 (75%), Gaps = 18/198 (9%)
Strand=Plus/Minus
Query 7839 TCGCAAATTGCAAGTCCAAGTTAGCCAGCCA---AGCT--------CATCTCATATGAAC 7887
||||||| ||||||| ||| ||||||| | | || | ||||| || ||
Sbjct 1063 TCGCAAAATGCAAGTGCAATTTAGCCA-CTAGATAGATTCAATTAACATCTGATTTGGTG 1005
Query 7888 TCTTATAGTTGAACATTTTTCTTGGATAATGGTTCATCCAATACTCGAT---AGCGGCGA 7944
|||| |||||||||||||||||||||||| ||||||||| | ||| || ||| |||
Sbjct 1004 TCTTGAAGTTGAACATTTTTCTTGGATAATTGTTCATCCAGTTCTCAATGTAAGCCACGA 945
Query 7945 CTTCTTCAGGGGTCGTCTTTGTTGTGCCTTTTGGCAGATGCCTACGAATCATTCGGTTAT 8004
||| || | ||| ||||||| |||||| || | |||||||| ||||||||||| |
Sbjct 944 CTTGTTTCGTGGTTTTCTTTGT---GCCTTTAGGTAAGTGCCTACGTATCATTCGGTTGT 888
Query 8005 GGTTTTCATTCGTCCCTC 8022
| |||||||| |||||||
Sbjct 887 GATTTTCATTTGTCCCTC 870
Score = 87.8 bits (96), Expect = 2e-13
Identities = 216/322 (67%), Gaps = 23/322 (7%)
Strand=Plus/Minus
Query 14117 TCTTGAGCCTTTTTAGCAGAGTATTTTACCTTCCGCTTGAGCTGGATTTCCCCTCGCTTC 14176
||||| || |||| || || || ||| ||| ||||| || | | |||||| |
Sbjct 306 TCTTGGGCAATTTTCGCTGAATACTTTGTCTTATATTTGAGTTGAACTGTCCCTCGTTGT 247
Query 14177 ATCTCTCTGTCAATCGTCCCATGAGCTTTATTCA----ATAAGCGCGCAATCTCACGGTT 14232
||||| | | |||||| | | |||||| | ||||||| || || || ||
Sbjct 246 ATCTCGTTATGAATCGTTTGAGGGGCTTTACCAAGACGATAAGCG----ATTTCTCGATT 191
Query 14233 GCTCAGTCCTTCTTTATTGTGCCAACGTTCAATGTTTAAACGGTCTTGATTGGTCAGGTG 14292
|| | | ||| |||||||||||||||||||| | ||| ||| | || | ||
Sbjct 190 ACTGACTTTTTCCTTATTGTGCCAACGTTCAATAAGGAGACGTTCTGACTCTGTTAAATG 131
Query 14293 TTTCCCTTTGCTCTGGCTTGTGATAGAATAGTCTTGCATC-TGAATTTCCTTTTTATACT 14351
|| ||||| || | || ||| || ||||||| |||| ||||| | |
Sbjct 130 CTTACCTTT---------TGAGGTATAATTGTTTTGCATCATGAAA--CCTTTCGACTTT 82
Query 14352 ATTTGGTCG-AACTTCTAGTATAAGAGATTCAGA-TGTTTTTTGCTTGACTCAAGGTGGC 14409
||| | | |||| | ||| ||| | ||||| |||||||| || |||||||||||
Sbjct 81 GTTTTCTAGCAACTACAAGTCTAACAT-TTCAGGGTGTTTTTTCATTCTCTCAAGGTGGC 23
Query 14410 TAACTTCATTTTACAATTTGCG 14431
||||||||||||||||||||||
Sbjct 22 TAACTTCATTTTACAATTTGCG 1
Score = 87.8 bits (96), Expect = 2e-13
Identities = 216/322 (67%), Gaps = 23/322 (7%)
Strand=Plus/Minus
Query 8592 TCTTGAGCCTTTTTAGCAGAGTATTTTACCTTCCGCTTGAGCTGGATTTCCCCTCGCTTC 8651
||||| || |||| || || || ||| ||| ||||| || | | |||||| |
Sbjct 306 TCTTGGGCAATTTTCGCTGAATACTTTGTCTTATATTTGAGTTGAACTGTCCCTCGTTGT 247
Query 8652 ATCTCTCTGTCAATCGTCCCATGAGCTTTATTCA----ATAAGCGCGCAATCTCACGGTT 8707
||||| | | |||||| | | |||||| | ||||||| || || || ||
Sbjct 246 ATCTCGTTATGAATCGTTTGAGGGGCTTTACCAAGACGATAAGCG----ATTTCTCGATT 191
Query 8708 GCTCAGTCCTTCTTTATTGTGCCAACGTTCAATGTTTAAACGGTCTTGATTGGTCAGGTG 8767
|| | | ||| |||||||||||||||||||| | ||| ||| | || | ||
Sbjct 190 ACTGACTTTTTCCTTATTGTGCCAACGTTCAATAAGGAGACGTTCTGACTCTGTTAAATG 131
Query 8768 TTTCCCTTTGCTCTGGCTTGTGATAGAATAGTCTTGCATC-TGAATTTCCTTTTTATACT 8826
|| ||||| || | || ||| || ||||||| |||| ||||| | |
Sbjct 130 CTTACCTTT---------TGAGGTATAATTGTTTTGCATCATGAAA--CCTTTCGACTTT 82
Query 8827 ATTTGGTCG-AACTTCTAGTATAAGAGATTCAGA-TGTTTTTTGCTTGACTCAAGGTGGC 8884
||| | | |||| | ||| ||| | ||||| |||||||| || |||||||||||
Sbjct 81 GTTTTCTAGCAACTACAAGTCTAACAT-TTCAGGGTGTTTTTTCATTCTCTCAAGGTGGC 23
Query 8885 TAACTTCATTTTACAATTTGCG 8906
||||||||||||||||||||||
Sbjct 22 TAACTTCATTTTACAATTTGCG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46313487009289
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |