Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq46 114 1e-20 seq24 98.7 8e-16 >seq46 Length=1231756 Score = 114 bits (126), Expect = 1e-20 Identities = 146/200 (73%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || ||| |||| || || || || |||||||| Sbjct 616526 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 616585 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| |||||||||||||| || | |||||||||||| || || ||| || Sbjct 616586 GATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 616645 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | ||||| ||| ||||| | ||| || ||||||||||| || ||||| || Sbjct 616646 GTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 616705 Query 45325 AAAGATTTGCATG-TTGCCT 45343 |||||||||||| |||||| Sbjct 616706 GAAGATTTGCATGTTTGCCT 616725 >seq24 Length=1627699 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || |||||| ||||||||| || ||||||||| || ||| | || || Sbjct 1128509 ACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCG 1128450 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| || |||||||| ||||| | ||||||||||||| Sbjct 1128449 AGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 1128390 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | |||| ||| ||||| | ||| || |||||| Sbjct 1128389 ATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTG 1128330 Query 45308 CCCGTCAGAGTCTTCAC 45324 || || || ||||| || Sbjct 1128329 CCGGTAAGGGTCTTGAC 1128313 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| |||||||||||||||||| || || ||| | || ||||| || Sbjct 1128732 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTG 1128673 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||| || || || | || || || |||||||| | |||||||| ||| ||| || Sbjct 1128672 CTTTCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTT 1128613 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | ||||| || || || | ||||||||||||||| || Sbjct 1128612 GGACTTGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGT 1128553 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||||||||||| || || ||||| Sbjct 1128552 AAGAGTCTTCACGAAAATCTGCAT 1128529 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| |||||| ||||||||| || ||||| || || |||| |||| || || || Sbjct 1128960 GTGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTG 1128901 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || || | ||||| || ||||| || | |||||||||||| ||| || Sbjct 1128900 CTTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTT 1128841 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | || | ||| || || | |||||||||||||| || Sbjct 1128840 CGACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGT 1128781 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| Sbjct 1128780 AAGGGTCTTGACAAAGATCTGCAT 1128757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074184039431