Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq190 136 8e-27 seq68 107 4e-18 >seq190 Length=2042575 Score = 136 bits (150), Expect = 8e-27 Identities = 123/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| || || || |||||||| || ||||| ||||| |||||||||||| Sbjct 1615472 GTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATTTTCTGG 1615531 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || || |||||||||| |||| |||||||||| |||| || | ||| Sbjct 1615532 CTCAAGAAGCGCGGCCTTATGCCTGGTCTTACCTTCTCCAATGAGCTCATCTCCCGTGAC 1615591 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || |||||| || ||| | ||||| Sbjct 1615592 GAGGGTCTCCACACCGACTTCGCGTGCCTCCTGTT 1615626 >seq68 Length=974473 Score = 107 bits (118), Expect = 4e-18 Identities = 190/272 (70%), Gaps = 4/272 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC-CTTAAGAG 94831 ||| | || || ||||| || || || | || ||||| ||||| || | ||| | | Sbjct 865768 ATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGC-GCATGTCTTCAACG 865826 Query 94832 TATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTT 94891 | |||||||| |||||||| |||||||| | | | | | |||||||| || || || | Sbjct 865827 TGTCATAAATTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCT 865886 Query 94892 GGGGTGTGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTC 94950 ||| | ||| | | || ||||| || ||||| |||||||| || || | | | Sbjct 865887 GGGCT-TGAGGGGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGAC 865945 Query 94951 GACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCC 95010 ||||| |||| || || ||||| ||| | | ||| || ||| ||||| || Sbjct 865946 GACATTAGATTGTACGTCTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCG 866005 Query 95011 ACACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 |||||||||||||||| |||||| ||||| || Sbjct 866006 ACACGCATAATCATGTGCTGAGGTCGCTCGAC 866037 Score = 86.0 bits (94), Expect = 1e-11 Identities = 117/164 (71%), Gaps = 12/164 (7%) Strand=Plus/Plus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 |||||| |||||| || || ||||| |||| ||||| || |||| | |||| ||| Sbjct 865393 GCCTTCCTTCTCATACTTTTCATACAAGGCCTCGAACTCCTCACCATAGCAATCGGCAAG 865452 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCA------ATTCTTCCCAGCCTTCACTCT 94511 ||| ||||| |||| |||||||||||||| ||| ||||| || |||| Sbjct 865453 GCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCA------ACTCG 865506 Query 94512 CTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCC 94555 || |||||| ||||| | | ||||| || |||| ||||||| Sbjct 865507 CTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCC 865550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581324721505