Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq24 143 6e-29
seq146 111 4e-19
>seq24
Length=1627699
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| ||||| || ||||| ||||| | |||||| || || || || ||
Sbjct 1128953 GTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCG 1128894
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | ||| ||||| || || ||||| || || ||||||||||| | ||
Sbjct 1128893 GCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTC 1128834
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||||||| || || || || || ||||| ||||| || ||||| ||
Sbjct 1128833 ACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGTAAGGGTC 1128774
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 1128773 TTGACAAAGATCTGCAT 1128757
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || ||||| || || | || ||||| || || ||||||
Sbjct 1128725 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 1128666
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | || ||||| ||||| || || || |||||||||||||| | ||
Sbjct 1128665 GCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 1128606
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| || | ||| || || || ||||| ||||| |||||||| ||
Sbjct 1128605 ACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTC 1128546
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1128545 TTCACGAAAATCTGCAT 1128529
Score = 111 bits (122), Expect = 4e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||||||||| || ||||| || |||| ||||| || || || ||||||
Sbjct 1128187 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCA 1128128
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || | |||||| || || || || || || || ||||| ||||| | ||
Sbjct 1128127 GCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 1128068
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | |||||| | || ||||| || || || ||||| || || | | ||
Sbjct 1128067 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGACTATT 1128008
Query 104543 T 104543
|
Sbjct 1128007 T 1128007
>seq146
Length=3337086
Score = 111 bits (122), Expect = 4e-19
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431
||||||||||| || ||||| || || | || || || || || ||||| || |||||
Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699
Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491
|| | ||||||||| ||||| ||||| || || ||||||||||| | || ||||| ||
Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639
Query 104492 ACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| || || | ||| || ||||| || || || |||||||| || || || || || ||
Sbjct 58638 ATCGTGTC-CGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395287266388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |