Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq24 143 6e-29 seq146 111 4e-19 >seq24 Length=1627699 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| || ||||| ||||| | |||||| || || || || || Sbjct 1128953 GTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCG 1128894 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | ||| ||||| || || ||||| || || ||||||||||| | || Sbjct 1128893 GCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTC 1128834 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||||| || || || || || ||||| ||||| || ||||| || Sbjct 1128833 ACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGTAAGGGTC 1128774 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 1128773 TTGACAAAGATCTGCAT 1128757 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || || ||||| || || | || ||||| || || |||||| Sbjct 1128725 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 1128666 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | || ||||| ||||| || || || |||||||||||||| | || Sbjct 1128665 GCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 1128606 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || | ||| || || || ||||| ||||| |||||||| || Sbjct 1128605 ACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGTC 1128546 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1128545 TTCACGAAAATCTGCAT 1128529 Score = 111 bits (122), Expect = 4e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| || ||||| || |||| ||||| || || || |||||| Sbjct 1128187 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCA 1128128 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | |||||| || || || || || || || ||||| ||||| | || Sbjct 1128127 GCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 1128068 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| || || || ||||| || || | | || Sbjct 1128067 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGACTATT 1128008 Query 104543 T 104543 | Sbjct 1128007 T 1128007 >seq146 Length=3337086 Score = 111 bits (122), Expect = 4e-19 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 ||||||||||| || ||||| || || | || || || || || ||||| || ||||| Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||||||||| ||||| ||||| || || ||||||||||| | || ||||| || Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639 Query 104492 ACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | || || | ||| || ||||| || || || |||||||| || || || || || || Sbjct 58638 ATCGTGTC-CGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395287266388