Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq124 140 2e-28 seq128 131 1e-25 seq92 104 2e-17 seq24 100 2e-16 >seq124 Length=208 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 178 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 119 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 118 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 84 >seq128 Length=230351 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct 52129 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGT 52070 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 52069 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 52035 >seq92 Length=447 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| | Sbjct 326 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCTC 267 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 266 GCCAATATTTAGCTTTA 250 >seq24 Length=1627699 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || || ||| |||||| || |||||||||||||| | | || |||| || | || Sbjct 1128959 TGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGC 1128900 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || |||||||| || || || || ||||||| ||| | || || |||||| ||| || Sbjct 1128899 TTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTC 1128840 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||||||| | || ||||| | |||||||| | ||||| || || || || Sbjct 1128839 GACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGTA 1128780 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | ||| || || || |||||||| Sbjct 1128779 AGGGTCTTGACAAAGATCTGCAT 1128757 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | ||||| ||| |||||| ||||| |||||||||| Sbjct 1128757 TACCACCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAG 1128698 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | || ||||| ||||| || || ||||| ||||||| | Sbjct 1128697 AAAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGGAG 1128638 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || || ||| ||| || ||| || || | || || || ||||| Sbjct 1128637 GGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAA 1128578 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||| || || || || | || |||||||| |||||||| Sbjct 1128577 CTTCGAGGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 1128529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946338662341