Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq24 111 1e-19
seq146 84.2 2e-11
>seq24
Length=1627699
Score = 111 bits (122), Expect = 1e-19
Identities = 147/202 (73%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| | ||||| || ||||||| |||| || |||||||| ||||| |||||
Sbjct 1128313 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGA- 1128371
Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128
|| || ||| || ||| ||||| || || ||||| ||||||||||| || | |
Sbjct 1128372 -CAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 1128430
Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188
|||| |||||||| || | || |||| ||||| | ||| |||||||| || || |
Sbjct 1128431 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 1128490
Query 25189 AATCCACGCTACATTTAGTGCT 25210
| |||||||| ||| | || ||
Sbjct 1128491 AGTCCACGCTCCATCTGGTCCT 1128512
Score = 109 bits (120), Expect = 5e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | ||||| || | || || ||||||| ||||| ||
Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| ||||| | || | ||| ||||| || || ||||| || || ||
Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAG-GACAAGGAGGGAATTCCCCCCGATCA 1128875
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | |||||||||||||| || | || || | ||||||| | ||||||||
Sbjct 1128876 GCAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAA 1128935
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||| || || || |||||||| ||
Sbjct 1128936 TATCCAGAAGGAGTCCACGCTCCA 1128959
Score = 82.4 bits (90), Expect = 7e-11
Identities = 128/181 (71%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080
||||| || ||||||| |||| || ||||| ||||| || ||||| || || |||
Sbjct 1128015 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGA--CAATGTCAAGT 1128072
Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140
|| ||| ||||| || || || || || ||||||||||| | ||||| || || |
Sbjct 1128073 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 1128132
Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200
| || | || || | || || | |||||||||||||| || |||||||| || |
Sbjct 1128133 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 1128192
Query 25201 A 25201
|
Sbjct 1128193 A 1128193
>seq146
Length=3337086
Score = 84.2 bits (92), Expect = 2e-11
Identities = 128/180 (71%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| | || ||||| ||||||| | || || ||||| || ||||| |||
Sbjct 58580 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 58639
Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126
|| ||||| | || | ||| ||||| || || || || || || |||||||| |
Sbjct 58640 GACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 58698
Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186
|||||| ||||| || || | || |||| ||||| | |||||||||||||| ||
Sbjct 58699 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 58758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326885669965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |