Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq24 111 1e-19 seq146 84.2 2e-11 >seq24 Length=1627699 Score = 111 bits (122), Expect = 1e-19 Identities = 147/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | ||||| || ||||||| |||| || |||||||| ||||| ||||| Sbjct 1128313 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGA- 1128371 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| ||||| || || ||||| ||||||||||| || | | Sbjct 1128372 -CAATGTTAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGA 1128430 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 |||| |||||||| || | || |||| ||||| | ||| |||||||| || || | Sbjct 1128431 TTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGG 1128490 Query 25189 AATCCACGCTACATTTAGTGCT 25210 | |||||||| ||| | || || Sbjct 1128491 AGTCCACGCTCCATCTGGTCCT 1128512 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || | || || ||||||| ||||| || Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| ||||| | || | ||| ||||| || || ||||| || || || Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAG-GACAAGGAGGGAATTCCCCCCGATCA 1128875 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | |||||||||||||| || | || || | ||||||| | |||||||| Sbjct 1128876 GCAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAA 1128935 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||| || || || |||||||| || Sbjct 1128936 TATCCAGAAGGAGTCCACGCTCCA 1128959 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080 ||||| || ||||||| |||| || ||||| ||||| || ||||| || || ||| Sbjct 1128015 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGA--CAATGTCAAGT 1128072 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| || || || || || ||||||||||| | ||||| || || | Sbjct 1128073 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 1128132 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | || | || || | || || | |||||||||||||| || |||||||| || | Sbjct 1128133 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 1128192 Query 25201 A 25201 | Sbjct 1128193 A 1128193 >seq146 Length=3337086 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || ||||| ||||||| | || || ||||| || ||||| ||| Sbjct 58580 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATC 58639 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || ||||| | || | ||| ||||| || || || || || || |||||||| | Sbjct 58640 GACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 58698 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 |||||| ||||| || || | || |||| ||||| | |||||||||||||| || Sbjct 58699 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 58758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326885669965