Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq190 129 7e-25 >seq190 Length=2042575 Score = 129 bits (142), Expect = 7e-25 Identities = 201/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| ||||| || | || || || | || || |||| |||||||| || ||| Sbjct 1615272 ATGTAGGTATCAATGAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGG 1615213 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| || | || || | |||||| || || |||| ||| ||||| Sbjct 1615212 AAACCGTAGAAGCAGCGGGCCTCAGGGATCTGGACCTCAGCGCTGAATCGCTCAACGAGG 1615153 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| ||||||||||| || || || || || | || ||| || |||| Sbjct 1615152 TTCTCGTTGACGATACCATCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGATGAAATAC 1615093 Query 93542 TTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||||| ||||| || ||| || | ||| ||| ||||| || || ||||| | ||| Sbjct 1615092 TTCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCT 1615033 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||| ||||||| || || || || || || |||||||| | ||| || Sbjct 1615032 TCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 1614986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859331279640