Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq24 132 4e-26
seq46 116 3e-21
seq146 113 4e-20
seq68 89.7 4e-13
>seq24
Length=1627699
Score = 132 bits (146), Expect = 4e-26
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||| | || || || ||| | || || ||||| ||| | |
Sbjct 1128529 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 1128588
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| || |||||||| || || ||||||||
Sbjct 1128589 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAG 1128648
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| ||||| || || ||| | || ||| ||||||| | || |||||||||
Sbjct 1128649 CAACGTCTTATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGATTACAAC 1128708
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| || || ||||||
Sbjct 1128709 ATTCAGAAGGAGTCCACC 1128726
Score = 125 bits (138), Expect = 6e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || ||| | || || ||||| || | ||
Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || | || || ||||| ||||||||||| ||||| ||||||||
Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||||||||| ||| | ||||| ||||| | || ||||||||
Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || |||||
Sbjct 1128937 ATCCAGAAGGAGTCCAC 1128953
Score = 109 bits (120), Expect = 5e-19
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || || || | |||| ||| | ||| || | ||
Sbjct 1128325 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTTAAGTCG 1128384
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||||||||| || || |||||||| | || || ||||||||
Sbjct 1128385 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATTTTCGCCGGCAAG 1128444
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| ||||||| ||||||| ||||| || || || || |||||
Sbjct 1128445 CAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCAC 1128497
Score = 102 bits (112), Expect = 7e-17
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || || || || | |||||| | ||| || ||||
Sbjct 1128015 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 1128074
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || ||||| ||||| || || || || || || ||
Sbjct 1128075 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAAAG 1128134
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| ||| ||| | || |||||||| ||||| || |||||||||
Sbjct 1128135 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACC 1128188
>seq46
Length=1231756
Score = 116 bits (128), Expect = 3e-21
Identities = 147/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| |||||||| || || || || |||| || || || |||| ||||| || || |
Sbjct 616721 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 616662
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
| | || || | ||| || |||| || || || ||||||||||| || || |||||
Sbjct 616661 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 616602
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||||| || || || || |||||||| ||| | ||||| ||||||| |||| || ||
Sbjct 616601 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 616542
Query 22395 CAACATTCAAAAAGAATCCACC 22416
|||||| || || || || |||
Sbjct 616541 CAACATCCAGAAGGAGTCGACC 616520
>seq146
Length=3337086
Score = 113 bits (124), Expect = 4e-20
Identities = 133/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || |||| ||||| || || || | || || |
Sbjct 58579 TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 58638
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || | || || ||||| ||||||||||| || || ||||||||||| |||||
Sbjct 58639 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 58698
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| || ||||| || ||| | |||||| ||||||| | || |||||||| ||||| ||
Sbjct 58699 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 58758
>seq68
Length=974473
Score = 89.7 bits (98), Expect = 4e-13
Identities = 309/475 (65%), Gaps = 13/475 (3%)
Strand=Plus/Plus
Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTT 130073
||| ||||| ||||| || | |||||| | ||| || ||| || | ||| || |||
Sbjct 865498 TTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCT-- 865555
Query 130074 TCTATCCTCGGCAC--CCATGTTACGTTTC--AGTTCAAGGAAATCGTAAATGTCGGCGT 130129
| | |||| | || || | | || | || || | ||| ||| | | || ||||
Sbjct 865556 -CGAACCTCTTCTTTGCCGTGGTTC-TTGCGAAGGTCCAAGAACTCGAATACATCTGCGT 865613
Query 130130 GCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGT 130186
|||| ||||||| || || || | || ||| || || || |||||||||||||
Sbjct 865614 GCCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGT 865673
Query 130187 GGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTG 130246
| ||| |||||| |||| || | ||| | | ||||||| || || ||||
Sbjct 865674 ACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTG 865733
Query 130247 TGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGC 130306
| | | |||| | ||| ||| |||| | ||| | | | || || ||||| |||
Sbjct 865734 TCCCCGCAATATATGAGCCTGTAGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGG 865793
Query 130307 CAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCT 130365
| | |||||| |||| |||| || | | | ||| |||||||| || | ||||| ||
Sbjct 865794 CCATTTTTGAGATCATTGCGC-ATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCA 865852
Query 130366 TCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGGGCGTAACATGATCCGCTGGCAAAC 130425
|| || |||| | |||||| || || | || ||||| | | | ||| | |||
Sbjct 865853 TCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGAGGGGTGCCGGCGTTAAAG 865912
Query 130426 AAAGTTGGACTTGCATGTGTATACATTTTGTGTGCCATCAAATTGTACGTTTCAA 130480
| ||| || ||||| || | | |||| | ||| | ||||||||| ||||
Sbjct 865913 AGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAA 865967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726920643215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |