Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq24 132 4e-26 seq46 116 3e-21 seq146 113 4e-20 seq68 89.7 4e-13 >seq24 Length=1627699 Score = 132 bits (146), Expect = 4e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||| | || || || ||| | || || ||||| ||| | | Sbjct 1128529 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 1128588 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| || |||||||| || || |||||||| Sbjct 1128589 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAG 1128648 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || ||| | || ||| ||||||| | || ||||||||| Sbjct 1128649 CAACGTCTTATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGATTACAAC 1128708 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 1128709 ATTCAGAAGGAGTCCACC 1128726 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || ||| | || || ||||| || | || Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || ||||| ||||||||||| ||||| |||||||| Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | ||||| ||||| | || |||||||| Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 1128937 ATCCAGAAGGAGTCCAC 1128953 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || | |||| ||| | ||| || | || Sbjct 1128325 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTTAAGTCG 1128384 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||||||||| || || |||||||| | || || |||||||| Sbjct 1128385 AAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAACGATTGATTTTCGCCGGCAAG 1128444 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| ||||||| ||||| || || || || ||||| Sbjct 1128445 CAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCAC 1128497 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || || || || | |||||| | ||| || |||| Sbjct 1128015 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGTCG 1128074 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||| ||||| || || || || || || || Sbjct 1128075 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAAAG 1128134 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||| ||| | || |||||||| ||||| || ||||||||| Sbjct 1128135 CAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACC 1128188 >seq46 Length=1231756 Score = 116 bits (128), Expect = 3e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| |||||||| || || || || |||| || || || |||| ||||| || || | Sbjct 616721 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 616662 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || || | ||| || |||| || || || ||||||||||| || || ||||| Sbjct 616661 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 616602 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||| || || || || |||||||| ||| | ||||| ||||||| |||| || || Sbjct 616601 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 616542 Query 22395 CAACATTCAAAAAGAATCCACC 22416 |||||| || || || || ||| Sbjct 616541 CAACATCCAGAAGGAGTCGACC 616520 >seq146 Length=3337086 Score = 113 bits (124), Expect = 4e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || |||| ||||| || || || | || || | Sbjct 58579 TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 58638 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || | || || ||||| ||||||||||| || || ||||||||||| ||||| Sbjct 58639 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCT 58698 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| || ||||| || ||| | |||||| ||||||| | || |||||||| ||||| || Sbjct 58699 TATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAA 58758 >seq68 Length=974473 Score = 89.7 bits (98), Expect = 4e-13 Identities = 309/475 (65%), Gaps = 13/475 (3%) Strand=Plus/Plus Query 130014 TTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTT 130073 ||| ||||| ||||| || | |||||| | ||| || ||| || | ||| || ||| Sbjct 865498 TTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCT-- 865555 Query 130074 TCTATCCTCGGCAC--CCATGTTACGTTTC--AGTTCAAGGAAATCGTAAATGTCGGCGT 130129 | | |||| | || || | | || | || || | ||| ||| | | || |||| Sbjct 865556 -CGAACCTCTTCTTTGCCGTGGTTC-TTGCGAAGGTCCAAGAACTCGAATACATCTGCGT 865613 Query 130130 GCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGT 130186 |||| ||||||| || || || | || ||| || || || ||||||||||||| Sbjct 865614 GCCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGT 865673 Query 130187 GGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTG 130246 | ||| |||||| |||| || | ||| | | ||||||| || || |||| Sbjct 865674 ACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTG 865733 Query 130247 TGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGC 130306 | | | |||| | ||| ||| |||| | ||| | | | || || ||||| ||| Sbjct 865734 TCCCCGCAATATATGAGCCTGTAGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGG 865793 Query 130307 CAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCT 130365 | | |||||| |||| |||| || | | | ||| |||||||| || | ||||| || Sbjct 865794 CCATTTTTGAGATCATTGCGC-ATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCA 865852 Query 130366 TCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGGGCGTAACATGATCCGCTGGCAAAC 130425 || || |||| | |||||| || || | || ||||| | | | ||| | ||| Sbjct 865853 TCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGAGGGGTGCCGGCGTTAAAG 865912 Query 130426 AAAGTTGGACTTGCATGTGTATACATTTTGTGTGCCATCAAATTGTACGTTTCAA 130480 | ||| || ||||| || | | |||| | ||| | ||||||||| |||| Sbjct 865913 AGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGTCTCAA 865967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726920643215