Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq57 109 1e-18 seq78 107 4e-18 seq68 89.7 1e-12 >seq57 Length=1006305 Score = 109 bits (120), Expect = 1e-18 Identities = 178/251 (71%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 279318 GACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCT 279376 ||||| | ||| |||| ||| ||| || ||||| || || |||| ||||| || Sbjct 684645 GACGAGGAGGAGGAGGATGAC-GAGGAGGGCGAGGACCTCTGCAACTGCACGTTCTCTCT 684703 Query 279377 CGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCG 279436 ||| ||||||| |||||||| || ||| || | ||| | ||||||||||| | || Sbjct 684704 CGCCTATGGTGCTAAGATTCTTCTCAACCAGACTGGTCTCCGCCTCAAGCGTGGCCAGCG 684763 Query 279437 GTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAA 279496 ||||| ||| ||||||||| || | || ||| ||||| ||||| ||||| || Sbjct 684764 CTATGGCCTCTGCGGTCCCAACGGCTCCGGCAAGTCTACTCTCATGCGTGCCATCAACAA 684823 Query 279497 CGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACG 279555 || ||| | || || || || || ||| || ||||| | ||| || | || ||||||| Sbjct 684824 CGAGCAGGTCGAGGGCTTCCCCAA-GCAGTCCGAGGTCAAGACCGTCTTCGTCGAGCACG 684882 Query 279556 ACATCGACTCC 279566 || | |||||| Sbjct 684883 ACTTGGACTCC 684893 Score = 84.2 bits (92), Expect = 4e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| || ||||| || || || ||| ||||| | ||| ||| || || Sbjct 686076 CACTCGCGCATGCGTGGTCTCTCCGGCGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 686135 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | || ||| ||||||| |||||||||||||| ||||| || |||||||| Sbjct 686136 TC-GTGGCAGCGACCCCACTTGATCGTCCTCGACGAGCCTACTAACTACCTCGACCGCGA 686194 >seq78 Length=830958 Score = 107 bits (118), Expect = 4e-18 Identities = 419/654 (64%), Gaps = 5/654 (1%) Strand=Plus/Minus Query 279711 GGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATGTCCTA 279770 |||||||||||||||||||| || || | || ||||| || | | ||||| |||||| Sbjct 679250 GGTGGTTGGAAGATGAAGCTTGCTCTGGCCCGAGCCATGCTCCAGAAAGCCGACGTCCTA 679191 Query 279771 CTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGTCCTAC 279830 || || || || || || || || | ||| ||||||| ||||| | | ||| Sbjct 679190 CTCCTGGACGAACCTACTAATCATCTCGACGTTGCCAACGTCAAGTGGCTCGAGAATTAC 679131 Query 279831 CTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTCCTAGAT 279890 || | || | | | | | || || || ||||||||||||||||| || Sbjct 679130 CTCAAGAGCAATACCCAGATCACCAGTTTGATCGTATCCCACGACTCTGGCTTCCTGGAC 679071 Query 279891 GCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAGCACATCGGC 279950 | || | | | ||| ||||| |||| || ||||||| || | || |||| Sbjct 679070 GAGGTTACCACGGATATCTACCACTACGAGCCCAACAAGAAGCTCGCCCACTACCGCGGC 679011 Query 279951 AACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATGACCTGAAGGAC 280010 ||||| | || ||||| | ||| || ||||| |||||| ||| | | Sbjct 679010 AACCTCGCCGCGTTCGTCAAGATGCGACCCGAGGCCAAGAGCTACTACACCCTCTCCGCC 678951 Query 280011 GCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATCACATCAAAGGAT 280070 ||| || | ||| | ||||| | || || | ||| || ||| || | | Sbjct 678950 TCCAACGTCCAGTTCAAGTTCCCCGCCCCTGGTCTCCTGACCGGAGTCAAGTCCATGACC 678891 Query 280071 CGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAATGGCCCCAA--CATCT 280128 |||||||| | ||| | | ||||||| | || ||| | ||| || |||| Sbjct 678890 CGCGCAATTCTCAAGATGAGCAATGTCTCCTACACCTACCCCGGCGCCCCGAAGCCATCC 678831 Query 280129 TCAGCAG-TGTCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAAT 280187 | | || | || ||| | || || ||| || ||| |||| || ||||| Sbjct 678830 CTCGTTGATGCCTCCTGCCAGCTCTCGCTGTCCTCTCGAGTTGCCATCATCGGTCCCAAC 678771 Query 280188 GGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGG 280247 ||||| || ||||| || | ||||| | |||||||| || || || || || || Sbjct 678770 GGTGCCGGCAAGTCCACTATGATCAAGCTTCTGACTGGTGA-ACTCATCCCCACGACCGG 678712 Query 280248 TCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCA 280306 | | | ||||||||||||| |||| || | ||| || ||||||||||| | || Sbjct 678711 CCGAGTCGAGAAGCATCCCAACTTGCGTATCGGCTACATCAAGCAGCACGCTTTGGAGCA 678652 Query 280307 CATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360 | |||||| || || || | ||| |||||||| ||| | |||||||| ||||| Sbjct 678651 CGTCGAGATGCATCTCGAGAAGACGCCTAACCAGTACCTGCAGTGGCGATATGC 678598 >seq68 Length=974473 Score = 89.7 bits (98), Expect = 1e-12 Identities = 179/264 (68%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||| | |||||||| |||||||| ||||| ||||| | | | || || | || Sbjct 864406 CTGTGACTGATCGATGAAGGCACCCCGATCGGCAGCCATCTGGACAACGGTACGCTGTGA 864465 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234 ||| ||||| |||||||| | |||||||| ||| |||||| | ||||| Sbjct 864466 GATTTCCCAGACGGTCTTGTAGAGTGCCTTGATATCCTCGGGAATGCTTGGGATATTCTG 864525 Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGC 293294 ||||| || || | ||| || || | |||||||| | || |||||| ||| | | Sbjct 864526 AATAGAGCCACCTTCGGCGATGATGCGATTCTTCATCGAGTCCGACCAAAGGCCAAGGTC 864585 Query 293295 AATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACG 293354 || || ||||||| ||| | | |||||| || |||| ||||| || | || || Sbjct 864586 AACAAGATCGCGGAGAAGCCAGGGGTTGACGACCTGGAATTCACCTGCCAAGACACGTCG 864645 Query 293355 GCTGTAAATGTTCGAAGTG-ATGG 293377 |||||||||||| ||| |||| Sbjct 864646 TTGGTAAATGTTCGAGGTGTATGG 864669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834021307451