Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq57 109 1e-18
seq78 107 4e-18
seq68 89.7 1e-12
>seq57
Length=1006305
Score = 109 bits (120), Expect = 1e-18
Identities = 178/251 (71%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 279318 GACGAAGCAGAGAAGGA-GACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCT 279376
||||| | ||| |||| ||| ||| || ||||| || || |||| ||||| ||
Sbjct 684645 GACGAGGAGGAGGAGGATGAC-GAGGAGGGCGAGGACCTCTGCAACTGCACGTTCTCTCT 684703
Query 279377 CGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCG 279436
||| ||||||| |||||||| || ||| || | ||| | ||||||||||| | ||
Sbjct 684704 CGCCTATGGTGCTAAGATTCTTCTCAACCAGACTGGTCTCCGCCTCAAGCGTGGCCAGCG 684763
Query 279437 GTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAA 279496
||||| ||| ||||||||| || | || ||| ||||| ||||| ||||| ||
Sbjct 684764 CTATGGCCTCTGCGGTCCCAACGGCTCCGGCAAGTCTACTCTCATGCGTGCCATCAACAA 684823
Query 279497 CGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACG 279555
|| ||| | || || || || || ||| || ||||| | ||| || | || |||||||
Sbjct 684824 CGAGCAGGTCGAGGGCTTCCCCAA-GCAGTCCGAGGTCAAGACCGTCTTCGTCGAGCACG 684882
Query 279556 ACATCGACTCC 279566
|| | ||||||
Sbjct 684883 ACTTGGACTCC 684893
Score = 84.2 bits (92), Expect = 4e-11
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| || ||||| || || || ||| ||||| | ||| ||| || ||
Sbjct 686076 CACTCGCGCATGCGTGGTCTCTCCGGCGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 686135
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | || ||| ||||||| |||||||||||||| ||||| || ||||||||
Sbjct 686136 TC-GTGGCAGCGACCCCACTTGATCGTCCTCGACGAGCCTACTAACTACCTCGACCGCGA 686194
>seq78
Length=830958
Score = 107 bits (118), Expect = 4e-18
Identities = 419/654 (64%), Gaps = 5/654 (1%)
Strand=Plus/Minus
Query 279711 GGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATGTCCTA 279770
|||||||||||||||||||| || || | || ||||| || | | ||||| ||||||
Sbjct 679250 GGTGGTTGGAAGATGAAGCTTGCTCTGGCCCGAGCCATGCTCCAGAAAGCCGACGTCCTA 679191
Query 279771 CTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGTCCTAC 279830
|| || || || || || || || | ||| ||||||| ||||| | | |||
Sbjct 679190 CTCCTGGACGAACCTACTAATCATCTCGACGTTGCCAACGTCAAGTGGCTCGAGAATTAC 679131
Query 279831 CTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTCCTAGAT 279890
|| | || | | | | | || || || ||||||||||||||||| ||
Sbjct 679130 CTCAAGAGCAATACCCAGATCACCAGTTTGATCGTATCCCACGACTCTGGCTTCCTGGAC 679071
Query 279891 GCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAGCACATCGGC 279950
| || | | | ||| ||||| |||| || ||||||| || | || ||||
Sbjct 679070 GAGGTTACCACGGATATCTACCACTACGAGCCCAACAAGAAGCTCGCCCACTACCGCGGC 679011
Query 279951 AACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATGACCTGAAGGAC 280010
||||| | || ||||| | ||| || ||||| |||||| ||| | |
Sbjct 679010 AACCTCGCCGCGTTCGTCAAGATGCGACCCGAGGCCAAGAGCTACTACACCCTCTCCGCC 678951
Query 280011 GCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATCACATCAAAGGAT 280070
||| || | ||| | ||||| | || || | ||| || ||| || | |
Sbjct 678950 TCCAACGTCCAGTTCAAGTTCCCCGCCCCTGGTCTCCTGACCGGAGTCAAGTCCATGACC 678891
Query 280071 CGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAATGGCCCCAA--CATCT 280128
|||||||| | ||| | | ||||||| | || ||| | ||| || ||||
Sbjct 678890 CGCGCAATTCTCAAGATGAGCAATGTCTCCTACACCTACCCCGGCGCCCCGAAGCCATCC 678831
Query 280129 TCAGCAG-TGTCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAAT 280187
| | || | || ||| | || || ||| || ||| |||| || |||||
Sbjct 678830 CTCGTTGATGCCTCCTGCCAGCTCTCGCTGTCCTCTCGAGTTGCCATCATCGGTCCCAAC 678771
Query 280188 GGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGG 280247
||||| || ||||| || | ||||| | |||||||| || || || || || ||
Sbjct 678770 GGTGCCGGCAAGTCCACTATGATCAAGCTTCTGACTGGTGA-ACTCATCCCCACGACCGG 678712
Query 280248 TCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCA 280306
| | | ||||||||||||| |||| || | ||| || ||||||||||| | ||
Sbjct 678711 CCGAGTCGAGAAGCATCCCAACTTGCGTATCGGCTACATCAAGCAGCACGCTTTGGAGCA 678652
Query 280307 CATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360
| |||||| || || || | ||| |||||||| ||| | |||||||| |||||
Sbjct 678651 CGTCGAGATGCATCTCGAGAAGACGCCTAACCAGTACCTGCAGTGGCGATATGC 678598
>seq68
Length=974473
Score = 89.7 bits (98), Expect = 1e-12
Identities = 179/264 (68%), Gaps = 1/264 (0%)
Strand=Plus/Plus
Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174
||| | |||||||| |||||||| ||||| ||||| | | | || || | ||
Sbjct 864406 CTGTGACTGATCGATGAAGGCACCCCGATCGGCAGCCATCTGGACAACGGTACGCTGTGA 864465
Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCTG 293234
||| ||||| |||||||| | |||||||| ||| |||||| | |||||
Sbjct 864466 GATTTCCCAGACGGTCTTGTAGAGTGCCTTGATATCCTCGGGAATGCTTGGGATATTCTG 864525
Query 293235 GATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACGAGC 293294
||||| || || | ||| || || | |||||||| | || |||||| ||| | |
Sbjct 864526 AATAGAGCCACCTTCGGCGATGATGCGATTCTTCATCGAGTCCGACCAAAGGCCAAGGTC 864585
Query 293295 AATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACG 293354
|| || ||||||| ||| | | |||||| || |||| ||||| || | || ||
Sbjct 864586 AACAAGATCGCGGAGAAGCCAGGGGTTGACGACCTGGAATTCACCTGCCAAGACACGTCG 864645
Query 293355 GCTGTAAATGTTCGAAGTG-ATGG 293377
|||||||||||| ||| ||||
Sbjct 864646 TTGGTAAATGTTCGAGGTGTATGG 864669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834021307451
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |