Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq24 132 1e-25
seq46 102 2e-16
seq190 93.3 1e-13
seq146 89.7 1e-12
>seq24
Length=1627699
Score = 132 bits (146), Expect = 1e-25
Identities = 170/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | || ||||| || | |||| || || |||||||| || ||
Sbjct 1128986 TGGCCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATATTGTAATCA 1128927
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || ||||| ||||| || | || || || || || || |||||||| ||| ||
Sbjct 1128926 GAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGA---TCG 1128870
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| ||||| || || ||||| || |||| ||||| || || || | |||| ||
Sbjct 1128869 GGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGAC 1128810
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||| |||||||| ||||| || |||||||| || ||||||||
Sbjct 1128809 TCAACTTCGAGCGTAATCGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 1128757
>seq46
Length=1231756
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||| ||||| ||||| || | || || || ||||||
Sbjct 616527 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 616586
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| |||||||| ||||| || || || |||||||| || | || || ||
Sbjct 616587 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 616646
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || || || || || ||||| ||||| || || || |||||||||
Sbjct 616647 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACG 616706
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 616707 AAGATTTGCAT 616717
>seq190
Length=2042575
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178
|||||| | ||| || |||| ||| | || |||| ||||| || | ||||||||
Sbjct 1615700 GAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 1615759
Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238
|| || || || ||||| || || | | || || ||||| ||||||| | |||
Sbjct 1615760 CAGTACATTGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGAAATGAGAAGATCTAC 1615819
Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298
| || | || ||||||| ||| ||||| || || |||| || ||||| ||||||
Sbjct 1615820 AGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTC 1615879
Query 269299 TTCGAAAAGCGTGTCAGCGACTATCA 269324
||||| |||||||| | ||||| ||
Sbjct 1615880 TTCGAGAAGCGTGTTGGTGACTACCA 1615905
>seq146
Length=3337086
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| || ||||| || || | || ||||| || || || | || ||||| ||||| ||
Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|||||||||||| |||||||| || || ||||| || || | ||||| || ||
Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || || || || || ||||| ||||| || || || |||||||||||
Sbjct 58638 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179651210878058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |