Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq24 132 1e-25 seq46 102 2e-16 seq190 93.3 1e-13 seq146 89.7 1e-12 >seq24 Length=1627699 Score = 132 bits (146), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || ||||| || | |||| || || |||||||| || || Sbjct 1128986 TGGCCACCACGAAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATATTGTAATCA 1128927 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| ||||| || | || || || || || || |||||||| ||| || Sbjct 1128926 GAAAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGA---TCG 1128870 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| ||||| || || ||||| || |||| ||||| || || || | |||| || Sbjct 1128869 GGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCGGAAGAC 1128810 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| |||||||| ||||| || |||||||| || |||||||| Sbjct 1128809 TCAACTTCGAGCGTAATCGTCTTGCCGGTAAGGGTCTTGACAAAGATCTGCAT 1128757 >seq46 Length=1231756 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| ||||| ||||| || | || || || |||||| Sbjct 616527 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 616586 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| |||||||| ||||| || || || |||||||| || | || || || Sbjct 616587 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 616646 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || ||||| ||||| || || || ||||||||| Sbjct 616647 TCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACG 616706 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 616707 AAGATTTGCAT 616717 >seq190 Length=2042575 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 |||||| | ||| || |||| ||| | || |||| ||||| || | |||||||| Sbjct 1615700 GAGTTCCTCACTGAGGCCCTCCCCTGTGCCCTGCTCGGCATGAACGCGAACCTCATGAAG 1615759 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238 || || || || ||||| || || | | || || ||||| ||||||| | ||| Sbjct 1615760 CAGTACATTGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGAAATGAGAAGATCTAC 1615819 Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298 | || | || ||||||| ||| ||||| || || |||| || ||||| |||||| Sbjct 1615820 AGGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTC 1615879 Query 269299 TTCGAAAAGCGTGTCAGCGACTATCA 269324 ||||| |||||||| | ||||| || Sbjct 1615880 TTCGAGAAGCGTGTTGGTGACTACCA 1615905 >seq146 Length=3337086 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || ||||| || || | || ||||| || || || | || ||||| ||||| || Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||||||| |||||||| || || ||||| || || | ||||| || || Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || || ||||| ||||| || || || ||||||||||| Sbjct 58638 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651210878058