Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq68 183 3e-41 >seq68 Length=974473 Score = 183 bits (202), Expect = 3e-41 Identities = 599/920 (65%), Gaps = 8/920 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||| | |||||| || || || |||||||||||| || | ||||| Sbjct 866103 AATTACCAATACTTCGGCTTCAAGACCCTCGAACGGTCGTACCTCCTGAAACTCGATGGG 866044 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||| || || || | ||||| |||||| |||| ||| ||| | Sbjct 866043 AAGATTGTCGAGCGACCTCAGCACATGATTATGCGTGTCGCCGTCGGTATTTGGGGCGAT 865984 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||| | | ||| | | | | || ||| | ||| | || |||| | Sbjct 865983 GACGTTGAGCGTGTGATTGAGACGTACAATCTAATGTCGTCCAAATTCTTCACTCATG-C 865925 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || || || ||||| || ||||| | ||| ||||||| || ||||| | Sbjct 865924 TTCACCCACTCTCTTTAACGCCGGCACCCCTCAAGCCCAGCTGTCTTCATGCTTCCTCGT 865865 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| || || ||||||| |||| | ||| || || | | Sbjct 865864 CGAC-ATGAAGGATGATAGTATTGAGGGAATTTATGACACGTTGAAGACATGCGCAATGA 865806 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||||||| || || || ||||| ||| |||| | | || || | || || | Sbjct 865805 TCTCAAAAATGGCCGGTGGCATCGGCCTCAACATCCATCGCATTCGCGCTACAGGCTCAT 865746 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 | || || || ||||| || ||||||||| | | || ||||| || |||||||||| Sbjct 865745 ATATTGCGGGGACAAATGGAACATCCAACGGCATTATTCCCATGCTTCGTGTCTTCAACA 865686 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | ||||| ||||| |||||| | | | ||| | || || |||| | Sbjct 865685 ACACCGCCAGGTACGTTGACCAAGGTGGTAATAAGCGCCCGGGAGCCTTTGCCATCTACC 865626 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | || || |||||||| || || | ||| | ||||| || |||||||||||||| | Sbjct 865625 TTGAACCATGGCACGCAGATGTATTCGAGTTCTTGGACCTTCGCAAGAACCACGGCAAAG 865566 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || | ||| | || |||||| ||| |||||| | || || ||||| ||||| | Sbjct 865565 AAGAGGTTCGAGCCCGGGATCTCTTCCTCGCGCTCTGGATTCCCGATCTTTTCATGAAGC 865506 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || || || ||| || ||||| || | || ||||| ||||| ||||| || ||| Sbjct 865505 GAGTTGAAAAGAACGGCGACTGGACCCTGATGTGCCCCAACGAATGCCCCGGCCTTGCCG 865446 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAGGCC 94431 | | ||| | || || | |||||||| || || | | ||| | || | Sbjct 865445 ATTGCTATGGTGAGGAGTTCGAGGCCTTGTATGAAAAGTATGAGAAGGAAGGCCGCGGTC 865386 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| | | | ||| ||||| ||| | ||| |||| | ||| || || Sbjct 865385 -GCAAGACTCTCAAGGCTCAAAAGCTCTGGTACGCCATCTTGGAGGCTCAGACCGAAACA 865327 Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 || | || | ||| | | |||||| | ||| |||| |||| |||||| || |||| Sbjct 865326 GGAAATCCTTTCATGCTTTACAAGGACCACTG-CAACCGCAAGAGCAACCAAAAGAACCT 865268 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || ||| ||||| ||||| ||||||||||| ||||||| | ||||||| || Sbjct 865267 TGGCACTATCCGCAGCTCCAATCTCTGCACCGAGATCATCGAGTACTCGGCTCCGGATGA 865208 Query 94611 GATTGCTGTGTGTAACCTGG 94630 | || || || ||| ||| Sbjct 865207 AGTGGCGGTTTGCAACTTGG 865188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721895167560