Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq24 129 6e-25
seq190 93.3 4e-14
seq46 91.5 1e-13
seq146 82.4 7e-11
>seq24
Length=1627699
Score = 129 bits (142), Expect = 6e-25
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| |||||||| | ||||| ||| || ||||| ||||||
Sbjct 1128725 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 1128666
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | || |||||||||||||| ||||||||||| ||| || || ||||
Sbjct 1128665 GCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTG 1128606
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| ||||| ||| |||||||| || ||||||| ||| | ||| ||||| || |||||
Sbjct 1128605 ACGTTGT-CGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAGT 1128547
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || |||||||||||
Sbjct 1128546 CTTCACGAAAATCTGCAT 1128529
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975
||| ||||| || || ||||||||||| | |||||| || || ||||| || ||
Sbjct 1128954 CGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGCTTGCC 1128895
Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035
|| | || | |||||||||||||| || || |||||||||||| || ||| |||
Sbjct 1128894 GGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTT 1128835
Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| | |||| ||| || | | ||| ||||||| || | ||| |||||||| || ||
Sbjct 1128834 CACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGTAAGGGT 1128775
Query 127096 TTTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 1128774 CTTGACAAAGATCTGCAT 1128757
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||| ||| | ||| ||||| || || |||||||| |||
Sbjct 1128527 CCACCACGGAGACGGAGGACCAGATGGAGCGTGGACTCCTTCTGGATATTGTAGTCGGAG 1128468
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || ||| | |||||||| || || || |||||
Sbjct 1128467 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGTTGTTGGTCAGGAGGA 1128408
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| ||| ||| | | |||| |||||| | ||| ||
Sbjct 1128407 ATACCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATGGTGTCGGACGACTCAACC 1128348
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|||| ||| | || |||||||| || || || ||
Sbjct 1128347 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 1128313
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || |||||||||||||| | || || || || ||||| ||||||
Sbjct 1128187 GTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCA 1128128
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | |||| ||||| || ||||| || ||||||||||||||| ||| ||| ||||
Sbjct 1128127 GCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 1128068
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| | |||| ||| || | |||||| |||| ||| | || ||||||||
Sbjct 1128067 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 1128015
>seq190
Length=2042575
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 47343 GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAA 47402
||||| || | || |||||| || ||| |||||| || | ||||| || |||
Sbjct 1615667 GACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCCCTGT 1615726
Query 47403 TCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGC 47462
| | | || ||||||||| | | |||| ||||||| || || ||||||||| |
Sbjct 1615727 GCCCTGCTCGGCATGAACGCGAACCTCATGAAGCAGTACATTGAGTTCGTCGCCGACAGG 1615786
Query 47463 CTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATG 47522
|||||||| || || ||||| ||| || || || ||||| || |||
Sbjct 1615787 CTGCTCGTCGCCCTCGGAAATGAGAAGATCTACAGGTCCACCAACCCCTTCGACTTCATG 1615846
Query 47523 AACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
| ||||| || |||| |||||||||||||| ||||||||||| || || || ||
Sbjct 1615847 GAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 1615902
>seq46
Length=1231756
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | ||||| || || ||||| || ||
Sbjct 616521 GTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 616580
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| ||||| || ||||| || ||||||||||||||| ||| || ||||
Sbjct 616581 GCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 616640
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||||| |||||| || | ||| | || ||||| || || ||
Sbjct 616641 ACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 616700
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || || ||||||
Sbjct 616701 TTGACGAAGATTTGCATG 616718
>seq146
Length=3337086
Score = 82.4 bits (90), Expect = 7e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| |||||||||||||| | ||||| ||| || ||||| ||||| ||| | ||
Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATA 58699
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| ||||| ||||||||||| || |||||||||||| || || ||| | | |||
Sbjct 58698 AGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 58639
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| ||||||| |||||| || | ||| | || || || || || || || || |||
Sbjct 58638 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAA 58579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499545866640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |