Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq190 178 1e-39 seq46 141 9e-29 seq24 96.9 3e-15 >seq190 Length=2042575 Score = 178 bits (196), Expect = 1e-39 Identities = 332/481 (69%), Gaps = 10/481 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || | | || ||| | ||| || || ||||||||| Sbjct 1615887 TTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1615828 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||| ||| | |||| || ||||||||||||||||||| |||||| Sbjct 1615827 GTGGACCTGTAGATCTTCTCATTTCCGA---GGGCGACGAGCAGCCTGTCGGCGACGAAC 1615771 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTT 132799 || ||||| ||| |||| | ||||| | | | || ||||| |||| || || || | Sbjct 1615770 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGG-GCACAGGGGAGGGCCT 1615713 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | ||||| || |||||||| ||| || || || | ||| ||| | | | || | Sbjct 1615712 CAGTGAGGAACTCCTGCTCGATCTTGACGGCATCAGTAATGATGTCCTTGATGAGCTGCT 1615653 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | || || ||| | || ||||| | ||| || |||||| || | |||| Sbjct 1615652 TGTCGGGGCGGTGCTTGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTGTGGAGACCCT 1615593 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | ||| ||||| || ||| ||| || | || ||||| |||||||| || |||| Sbjct 1615592 CGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATAAGGCCGCGCTTCTTGA 1615533 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| |||||| || ||||||| ||||||||||| ||||| || | Sbjct 1615532 GCCAGAAAATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAA 1615473 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 | ||||||| |||| ||||| || | ||| |||||||| || ||||| ||||||| Sbjct 1615472 CGAGGCGCTGAGCGAAGGTGGCCTCGCGGTCGGCAATCCAGCGAAGAGCCCAGTCGGCCT 1615413 Query 133100 T 133100 | Sbjct 1615412 T 1615412 Score = 134 bits (148), Expect = 1e-26 Identities = 198/277 (71%), Gaps = 5/277 (2%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| || |||||| || || | |||||||| | ||||||||| ||| || || Sbjct 1615270 GTAGGTATCAATGAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 1615211 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 ||||| ||||| || ||||| | ||| || || | || ||| ||||| || || | Sbjct 1615210 ACCGTAGAAGCAGCGGGCCTCAGGGATCTGGACCTCA-GCGCTGAATCGCTCAACGAGGT 1615152 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | ||||||||||| || ||| ||||||||| ||||| || | |||| |||||||| Sbjct 1615151 TCTCGTTGACGATACCATCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGATGAAATACT 1615092 Query 133346 GCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 ||||| || || | | | ||||||| | |||||||| || || | ||| | Sbjct 1615091 TCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCTT 1615032 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||| || || |||||||| || |||||||| Sbjct 1615031 CGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 1614995 >seq46 Length=1231756 Score = 141 bits (156), Expect = 9e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| || || || |||||||| ||||||||| | || |||||| | Sbjct 616721 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 616662 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | | | | || || |||| ||||| ||||| || ||| |||| Sbjct 616661 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 616602 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | ||| ||||| ||||| || |||| ||||||||| ||||| Sbjct 616601 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 616542 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| |||| || || | || || ||| | | ||||| Sbjct 616541 CAACATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 616491 >seq24 Length=1627699 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| ||||||||| |||| |||||| || | || | | | | | | || Sbjct 1128013 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 1128072 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| || ||| ||||||||||||| || |||| ||| || | Sbjct 1128073 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 1128132 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || |||| || ||||| || ||||| || || |||||| | || || | Sbjct 1128133 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 1128192 Query 38446 A 38446 | Sbjct 1128193 A 1128193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || || || |||| || ||| | || Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || || | ||||| |||||||||||| |||| || Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || ||||| ||||| || |||| ||||| || || ||||| Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936 Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446 ||||| ||||| | ||||| || Sbjct 1128937 ATCCAGAAGGAGTCCACGCTCCA 1128959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171480794240