Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq190 178 1e-39
seq46 141 9e-29
seq24 96.9 3e-15
>seq190
Length=2042575
Score = 178 bits (196), Expect = 1e-39
Identities = 332/481 (69%), Gaps = 10/481 (2%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | || ||| | ||| || || |||||||||
Sbjct 1615887 TTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1615828
Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | ||||| ||| | |||| || ||||||||||||||||||| ||||||
Sbjct 1615827 GTGGACCTGTAGATCTTCTCATTTCCGA---GGGCGACGAGCAGCCTGTCGGCGACGAAC 1615771
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGC-AGCGCTT 132799
|| ||||| ||| |||| | ||||| | | | || ||||| |||| || || || |
Sbjct 1615770 TCAATGTACTGCTTCATGAGGTTCGCGTTCATG-CCGAGCAGG-GCACAGGGGAGGGCCT 1615713
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
| ||||| || |||||||| ||| || || || | ||| ||| | | | || |
Sbjct 1615712 CAGTGAGGAACTCCTGCTCGATCTTGACGGCATCAGTAATGATGTCCTTGATGAGCTGCT 1615653
Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919
| || || ||| | || ||||| | ||| || |||||| || | ||||
Sbjct 1615652 TGTCGGGGCGGTGCTTGAGGTGGGAGAACAGGAGGCACGCGAAGTCGGTGTGGAGACCCT 1615593
Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979
|||| | ||| ||||| || ||| ||| || | || ||||| |||||||| || ||||
Sbjct 1615592 CGTCACGGGAGATGAGCTCATTGGAGAAGGTAAGACCAGGCATAAGGCCGCGCTTCTTGA 1615533
Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039
|||| || |||| |||||| || ||||||| ||||||||||| ||||| || |
Sbjct 1615532 GCCAGAAAATGGAGGCGAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGAAGGCAA 1615473
Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099
| ||||||| |||| ||||| || | ||| |||||||| || ||||| |||||||
Sbjct 1615472 CGAGGCGCTGAGCGAAGGTGGCCTCGCGGTCGGCAATCCAGCGAAGAGCCCAGTCGGCCT 1615413
Query 133100 T 133100
|
Sbjct 1615412 T 1615412
Score = 134 bits (148), Expect = 1e-26
Identities = 198/277 (71%), Gaps = 5/277 (2%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| || |||||| || || | |||||||| | ||||||||| ||| || ||
Sbjct 1615270 GTAGGTATCAATGAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 1615211
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285
||||| ||||| || ||||| | ||| || || | || ||| ||||| || || |
Sbjct 1615210 ACCGTAGAAGCAGCGGGCCTCAGGGATCTGGACCTCA-GCGCTGAATCGCTCAACGAGGT 1615152
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| ||||||||||| || ||| ||||||||| ||||| || | |||| ||||||||
Sbjct 1615151 TCTCGTTGACGATACCATCGGAGGCGGCGAAGAAGGCAAGAATGTGCGAGATGAAATACT 1615092
Query 133346 GCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402
||||| || || | | | ||||||| | |||||||| || || | ||| |
Sbjct 1615091 TCTCGTCATCATTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCTT 1615032
Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| | ||||| || || |||||||| || ||||||||
Sbjct 1615031 CGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 1614995
>seq46
Length=1231756
Score = 141 bits (156), Expect = 9e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| |||||||| ||||| || || || |||||||| ||||||||| | || |||||| |
Sbjct 616721 AAACATGCAAATCTTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTC 616662
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| | |||| | | | | || || |||| ||||| ||||| || ||| ||||
Sbjct 616661 CTCGGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 616602
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||||||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||
Sbjct 616601 CCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCTGACTA 616542
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| |||| || || | || || ||| | | |||||
Sbjct 616541 CAACATCCAGAAGGAGTCGACCCTCCACCTCGTCCTCCGTCTTCGTGGCGG 616491
>seq24
Length=1627699
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| ||||| ||||||||| |||| |||||| || | || | | | | | | ||
Sbjct 1128013 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCTGATACCATCGACAATGTCAAGT 1128072
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||| ||||| || ||| ||||||||||||| || |||| ||| || |
Sbjct 1128073 CGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGATTTTCGCTGGAA 1128132
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| ||||| || |||| || ||||| || ||||| || || |||||| | || || |
Sbjct 1128133 AGCAGCTTGAGGACGGCCGAACCCTTTCTGATTACAATATTCAGAAGGAATCCACCCTTC 1128192
Query 38446 A 38446
|
Sbjct 1128193 A 1128193
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| || || || |||| || ||| | ||
Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | | || || || | ||||| |||||||||||| |||| ||
Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||||| || ||||| ||||| || |||| ||||| || || |||||
Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936
Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446
||||| ||||| | ||||| ||
Sbjct 1128937 ATCCAGAAGGAGTCCACGCTCCA 1128959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171480794240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |