Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq68 114 1e-20 >seq68 Length=974473 Score = 114 bits (126), Expect = 1e-20 Identities = 318/488 (65%), Gaps = 0/488 (0%) Strand=Plus/Plus Query 48156 CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATA 48215 || || ||||| || || ||||||| | ||| || | | |||| |||| |||| Sbjct 865454 CCGGGGCATTCGTTGGGGCACATCAGGGTCCAGTCGCCGTTCTTTTCAACTCGCTTCATG 865513 Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCA 48275 || | ||| || ||||| || || | || | ||||| | || | ||||| ||||| Sbjct 865514 AAAAGATCGGGAATCCAGAGCGCGAGGAAGAGATCCCGGGCTCGAACCTCTTCTTTGCCG 865573 Query 48276 CTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATT 48335 ||| | ||| || | || || | || ||| || ||||||||||| | || || Sbjct 865574 TGGTTCTTGCGAAGGTCCAAGAACTCGAATACATCTGCGTGCCATGGTTCAAGGTAGATG 865633 Query 48336 GCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAA 48395 || | | || || || |||||||| ||||| || | || ||||| || ||||| | Sbjct 865634 GCAAAGGCTCCCGGGCGCTTATTACCACCTTGGTCAACGTACCTGGCGGTGTTGTTGAAG 865693 Query 48396 ACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCA 48455 || | | ||| || | ||| || || ||| | ||||| || |||| |||||| || Sbjct 865694 ACACGAAGCATGGGAATAATGCCGTTGGATGTTCCATTTGTCCCCGCAATATATGAGCCT 865753 Query 48456 CTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCA 48515 |||| | || | || | || || ||||| |||||||| || || | || Sbjct 865754 GTAGCGCGAATGCGATGGATGTTGAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCG 865813 Query 48516 CACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAA 48575 || || | || ||||||||||| || ||||||||||| |||| | | || || Sbjct 865814 CATGTCTTCAACGTGTCATAAATTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAG 865873 Query 48576 CAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATA 48635 || ||||| || | ||| || || | ||||| | || || || |||||| | Sbjct 865874 CATGAAGACAGCTGGGCTTGAGGGGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGAGTG 865933 Query 48636 AACCATTT 48643 || |||| Sbjct 865934 AAGAATTT 865941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107317438040