Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq24 116 3e-20 >seq24 Length=1627699 Score = 116 bits (128), Expect = 3e-20 Identities = 160/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || || |||||||| || || ||| |||||||||| || || | Sbjct 1128747 GAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCG 1128688 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| || || ||||| ||||| ||||| | ||||||||| ||||| || || || Sbjct 1128687 GCCATCTTCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTC 1128628 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||| ||||| || || || || || || || | ||| | | |||||| | Sbjct 1128627 CTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGA-TGATTCAACTTCGAGGG 1128569 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| || || ||||||||||| || |||||||| |||||| Sbjct 1128568 TAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTGCATA 1128528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029284841368390