Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq24 118 8e-22 >seq24 Length=1627699 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || |||||| ||| || || |||||||||||||| ||| | ||| |||| || | |||| Sbjct 1128959 TGGAGCGTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACCGTCCTCAAGCTGC 1128900 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || |||||||| || || ||||| ||||| | ||||| ||||||||||| |||||| Sbjct 1128899 TTGCCGGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTC 1128840 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || | ||| || || | ||||||||| || || || Sbjct 1128839 GACTTCACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGTA 1128780 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || ||||| |||||||| Sbjct 1128779 AGGGTCTTGACAAAGATCTGCAT 1128757 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||||||||||||||| || |||| |||| || | |||||| || || || Sbjct 1128181 TCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCAGCGAAA 1128122 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| |||||||| || | ||| | |||||||||||| Sbjct 1128121 ATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTC 1128084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936620395153