Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq24 123 2e-22
seq146 104 2e-16
>seq24
Length=1627699
Score = 123 bits (136), Expect = 2e-22
Identities = 161/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| || || ||||| || || || || || ||||||| || ||
Sbjct 1128750 ACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGT 1128691
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | |||||| || |||||||||||||| ||||||||||| ||||| ||||| || ||
Sbjct 1128690 GCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCC 1128631
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| || |||||||| ||||| || || || || | || | || ||| |
Sbjct 1128630 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCCGATGATTCAA-CTTCGA 1128572
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||||| || || || || |||||||| |||||||| ||
Sbjct 1128571 GGGTAATCGTCTTGCCAGTAAGAGTCTTCACGAAAATCTG 1128532
Score = 102 bits (112), Expect = 5e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| ||||| ||||| ||||| || ||| || || ||| ||||||| || ||
Sbjct 1128212 ACGAAGGCGGAGAACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGT 1128153
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | || ||||| ||||||||||| ||||| || || ||||| || || || || ||
Sbjct 1128152 TCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCC 1128093
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714
|||||||| || ||||| |||||| || || |||||||
Sbjct 1128092 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCAG 1128049
>seq146
Length=3337086
Score = 104 bits (114), Expect = 2e-16
Identities = 128/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649
|| ||| ||||||| || || | | ||| || || |||||||| || |||||||||||
Sbjct 58753 AATATTGTAATCAGAAAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAAATAAGACG 58694
Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709
|||||||| ||||| ||||| |||||||| |||||||| || ||| || || ||
Sbjct 58693 CTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCGATCGT 58634
Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAA 480764
|| | | |||||||| || || ||||| ||||| ||||| ||||||
Sbjct 58633 GTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAA 58579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268170149186228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |