Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 187 3e-41 seq168 132 6e-25 seq190 127 2e-23 seq68 105 8e-17 seq201 104 3e-16 >seq2 Length=1899565 Score = 187 bits (206), Expect = 3e-41 Identities = 265/373 (71%), Gaps = 0/373 (0%) Strand=Plus/Plus Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925 || ||| |||||||| || || | | | || ||| || | |||||||| || ||| Sbjct 485316 GAAGGCAACATGCCCCACGTCATCATCTCTGGAATGCCAGGTATCGGCAAGACGACAAGC 485375 Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985 ||| ||||| ||||| | | || | ||| | |||||||| || |||||| Sbjct 485376 ATCCACTGTCTCGCGCGGCAATTACTCGGAGACGCCTATAAGGAGGCCGTACTAGAACTC 485435 Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045 ||||| ||||| | ||| |||||||||||||||| |||||| | |||| Sbjct 485436 AACGCCAGCGACGAAAGAGGCATCGACGTCGTGCGCAACCGAATCAAGGGCTTCGCCCAA 485495 Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105 |||| || ||| |||||||| ||||||||| | ||||||||||||| |||||| || Sbjct 485496 AAGAAAGTCACCCTCCCGCCCGGCCGCCACAAGCTCGTCATCCTCGACGAAGCCGACAGC 485555 Query 1574106 CTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACG 1574165 | || |||| || || |||||||| || |||||||||| || ||||||||||| Sbjct 485556 ATGACTTCGGGCGCGCAACAGGCCCTCCGCCGAACCATGGAAATCTACTCCAACACGACG 485615 Query 1574166 CGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGC 1574225 || || ||| | ||||||||| ||| | | | |||||| |||| ||| |||||| Sbjct 485616 CGATTCGCCTTCGCGTGCAACCAGTCTAACAAGATTATCGAGCCCCTGCAATCCCGCTGC 485675 Query 1574226 GCCATTCTGCGCT 1574238 || ||||| |||| Sbjct 485676 GCTATTCTTCGCT 485688 >seq168 Length=2801028 Score = 132 bits (146), Expect = 6e-25 Identities = 268/395 (68%), Gaps = 12/395 (3%) Strand=Plus/Minus Query 18097 TTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATG 18156 || || || || ||||| | |||||| |||||||||||| | || || ||||| Sbjct 2400568 TTCGGTGAATCCCACGGCAAAGCCGTCGGGTGCATCATCGACAACCCACCCCCCGGCATG 2400509 Query 18157 CCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCA 18216 | || |||| |||||||||| || || | | || ||||| || ||||| || | Sbjct 2400508 ACCCTCACCGAATCCGACATCCAACCCCAACTCAACCGCCGCCGCCCAGGCCAAAGCTCC 2400449 Query 18217 CTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGC 18276 | ||||||| ||| |||| || ||||| | |||||| || ||||| || |||| Sbjct 2400448 ATCACCACGCCTCGCGACGAAAAGGACCGCGTAACCATCCAATCCGGCACCGAATTCGGC 2400389 Query 18277 CTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGAC 18336 || |||||| | ||| || ||||| | || ||| |||||||| ||| ||| Sbjct 2400388 AAGACCCTCGGCACCCCCATCAGCCTCGTCGTCATGAACGAGGACCAGCGCCCCAAGGAC 2400329 Query 18337 TATTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATG 18390 || | ||| | || || ||||| || || |||||||||| ||||||| | Sbjct 2400328 TACGGCAACAAGACCATGGACGTCTACCCGCGCCCTTCCCACGCCGACTTCACCTACCTC 2400269 Query 18391 GCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCT---GCCCGCGAGACC 18447 | || |||||||||||||| | | |||| ||| || | | ||||||||||| Sbjct 2400268 GAGAAATACGGCATCAAGGC--CAGC-AGCGGTGGCGGGAGGAGTAGCGCCCGCGAGACT 2400212 Query 18448 CTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 | ||| || || |||||||| ||||| ||||| Sbjct 2400211 ATTGCGCGTGTGGCGGCCGGCGCTGTCGCTGAGAA 2400177 Score = 91.5 bits (100), Expect = 2e-12 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 19048 ACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGC 19107 |||||| ||||||||| || || ||||| || ||||||||| | || |||||||||| Sbjct 2399940 ACAGCACCGGCGGCACCGTCACCTGCGTTATCCGAAACGTGCCGTCGGGTCTCGGCGAGC 2399881 Query 19108 CGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCA 19167 | ||| |||||| | |||||| | ||| || |||||| || ||||| ||| || Sbjct 2399880 CCGCCTTCGACAAGCTTGAGGCCAAGATCGGTCATGCCATGATGAGCATCCCCGCCGTCA 2399821 Query 19168 AGGGATTCGAGATTGGCAGCGGGTT 19192 ||| ||||| || ||| ||| || Sbjct 2399820 AGGCCTTCGAAATCGGCTCCGGCTT 2399796 >seq190 Length=2042575 Score = 127 bits (140), Expect = 2e-23 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| |||| ||||| Sbjct 1615911 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAGATG 1615852 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | | ||||| ||| || |||||| | || Sbjct 1615851 TTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGTAGATCTTCTCATTTCCGAGGGCGACG 1615792 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| | ||||||||| ||||| |||||||| ||||||| ||||||||||||| Sbjct 1615791 AGCAGCCTGTCGGCGACGAACTCAATGTACTGCTTCATGAGGTTCGCGTTCATGCCGAGC 1615732 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 || || || || | ||| | | ||||| | |||||||| |||||| || Sbjct 1615731 AGGGCACAGGGGAGGGCCTCAGTGAGGAACTCCTGCTCGATCTTGACGGCATC 1615679 >seq68 Length=974473 Score = 105 bits (116), Expect = 8e-17 Identities = 259/390 (66%), Gaps = 17/390 (4%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | || |||| ||| ||||| || |||||||| | | ||||||||| Sbjct 865664 TGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTGGAT 865723 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 || || || ||||| | || | ||| | ||||| | || | | |||| Sbjct 865724 GTTCCATTTGTCCCCGCAATATATGAGCCTGTAGCGCGAATGCGATGGATGTTGAGGCCG 865783 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| |||||| || ||||| | ||||| ||| || | |||||| || || ||||| Sbjct 865784 ATGCCACCGGCCATTTTTGAGATCATTGCGCA-TGTCTTCAACGTGTCATAAATTCCCTC 865842 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || |||||||||| ||||| ||||| || || || | || | ||||| Sbjct 865843 AATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGAGGGGTGCC 865902 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||| ||||| ||||| | || ||||| || | |||||| | ||| || Sbjct 865903 GGCGTTAAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGATTGTACGT 865962 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | | ||| ||| | | ||||| || ||| ||| |||| |||||| Sbjct 865963 CTCAATCACACGCTCAACGTCATCGCCC-------CAA----ATA----CCGACGGCGAC 866007 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGAC 1630454 ||||| | ||||| ||| || |||||||| Sbjct 866008 ACGCATAATCATGTGCTGAGGTCGCTCGAC 866037 >seq201 Length=1935873 Score = 104 bits (114), Expect = 3e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||| | ||||| || ||||||||||| || || || | || |||||| | || |||||| Sbjct 1505074 GCCTCGAACTATCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 1505133 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||||| ||||| |||||||||||||| || || || | | ||| Sbjct 1505134 ATGATCAAGGGGAAGTCCCCCGACGAGATCCGCAAGACTTTCAATATTACGAACG 1505188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107121884351887