Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq68 197 1e-45 seq24 111 1e-19 seq146 86.0 6e-12 >seq68 Length=974473 Score = 197 bits (218), Expect = 1e-45 Identities = 974/1536 (63%), Gaps = 66/1536 (4%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| |||||||| ||||| || || || ||||||||| |||| | || Sbjct 864610 GTTGACGACCTGGAATTCACCTGCCAAGACACGTCGTTGGTAAATGTTCGAGGTGTATGG 864669 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||||| |||||||||| || ||||| |||| ||| | || || |||||| |||| Sbjct 864670 TTCAAAGCATTCGTTGTTCCCGAGAATTTGAGAGGTGCTTGCAGTGGGCATGGGGGCCAA 864729 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 |||||| || || | || || ||||||| | ||||| || | ||||| ||| Sbjct 864730 CAAAAGGCTGTTACGGACGCCATGCTGCTTGATCTGCTCCTTCAGAGCATCCCAGTTCCA 864789 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 ||| || || || |||||||| |||||||| | ||||| | ||||| Sbjct 864790 CAAGTCCGAGGGCTTGACATTCCACATGTCGTACTGGAGAATTCCTTGAGAGACGGGAGA 864849 Query 138741 GCCTTCGTACGAATCGTATACA--CCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGC 138798 || ||||||| ||| ||| || ||| | || | ||| | ||| || || Sbjct 864850 ACCCTCGTACG--TCGAATAGGGGCCCTGCTCCTTGGCGATCTCCATTGACGCTTCCAGA 864907 Query 138799 GCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCG 138858 || | | ||| || || ||| || || ||||||| |||||||||| | ||| Sbjct 864908 GCGGCGTGGTAGATTGTCTCGAAGATTTGAATATTGAGCTGCCGGGCCTCGGGGGATTCG 864967 Query 138859 TACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGG 138918 | ||||| || || ||| || || |||| |||||||| ||||| || | || Sbjct 864968 AAGGGCATACGCAGGGCAAGGAAGGCATCCGCCAATCCTTGCACACCCACACCAATGGGC 865027 Query 138919 CGATGGCGCAGATTTGACGCTTTTGCGG----CTTCGATAGGATAATAGTTTACATCGAT 138974 || ||||||| ||| ||| |||||| | | | || || || || ||||| || Sbjct 865028 CGGTGGCGCATATT----GCTGTTGCGGGCCTCCTGCACCGGGTAGTAATTGACATCAAT 865083 Query 138975 GATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTA 139034 ||| || || | |||||| ||||| ||||| || | | | | ||||| ||||| Sbjct 865084 GATCTTATTGAGATTTCGAACGACGACCTTGGTTACTTCGTGGAGTTTCTCAAAGTCGTA 865143 Query 139035 TGTGCCCCCGTTGTCGTCGACGA-CGTCGACAAATTTGTTGACACAAATCGAGGCTATGT 139093 |||| ||||| |||||||| || | ||| | || | ||| || | || Sbjct 865144 CTCGCCCTTGTTGTAGTCGACGAACGAGGGCAA-------GGCA---AGCGATGCCAAGT 865193 Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTAC 139153 |||| ||||||||||| || || | ||| |||| || |||| || | ||| | Sbjct 865194 TGCAAACCGCCACTTCATCCGGAGCCGAGTACTCGATGATCTCGGTGCAGAGATTGGAGC 865253 Query 139154 ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCA 139213 ||| || || | || | ||| ||||| || ||||| || || |||||||||| Sbjct 865254 TGCGGATAGTGCCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCA 865313 Query 139214 TATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCT---AG 139270 | | || | || ||||| || | ||| | ||| | || || | | || Sbjct 865314 TGAAAGGATTTCCTGTTTCGGTCTGAGCCTCCAAGATG---GCGTACCAGAGCTTTTGAG 865370 Query 139271 CTT---GTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGA 139327 | | | | | || || | | || ||| |||||||| || | | |||| Sbjct 865371 CCTTGAGAGTCTTGCGACCG---CGGCCTTCCTTCTCATACTTTTCATACAAGGCCTCGA 865427 Query 139328 ATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATA 139387 | ||||| ||| || | ||| || | || | || || ||||| || | ||| Sbjct 865428 ACTCCTCACCATAGCAATCGGCAAGGCCGGGGCATTCGTTGGGGCACATCAGGGTCCAGT 865487 Query 139388 CGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAAT 139447 |||||||| | || ||| ||||||| ||||| |||||||| | |||| | | || Sbjct 865488 CGCCGTTCTTTTCAACTCGCTTCATGAAAAGATCGGGAATCCAGAGCGCGAGGAAGAGAT 865547 Query 139448 CGCGCGC-----CTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCA 139500 | || || | |||| | | ||| || | | || | | || | ||| || Sbjct 865548 CCCGGGCTCGAACCTCTTCTTTGCCG------TGGTTC-TTGCGAAGGTCCAAGAACTCG 865600 Query 139501 AAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCA 139557 || || || |||||||||||||| || |||||||| | || || || || ||| Sbjct 865601 AATACATCTGCGTGCCATGGTTCAAGGTAGATGGCAAAGGCTCCCGGGCGCTTATTACCA 865660 Query 139558 CCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTC 139617 ||||| || |||| | | | || ||||| || || | ||| || | ||| | Sbjct 865661 CCTTGGTCAACGTACCTGGCGGTGTTGTTGAAGACACGAAGCATGGGAATAATGCCGTTG 865720 Query 139618 GCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATT 139673 | |||||| || || || | ||| | |||| ||| || | | ||| | || Sbjct 865721 GATGTTCCATTTGTCCCCGCAATATATGAGCCTGT----AGCGCGAATGCGATGGATGTT 865776 Query 139674 GATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATA 139732 || |||||| || ||| | | ||| || || | ||| || | | || || || || | Sbjct 865777 GAGGCCGATGCCACCGGCCATTTTTGAGATCATTGCGC-ATGTCTTCAACGTGTCATAAA 865835 Query 139733 TACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTT 139792 | || || || || |||| ||| ||| || |||||||| || || || | | | Sbjct 865836 TTCCCTCAATACTATCATCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGGCTTGAG 865895 Query 139793 TCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATT 139852 |||||||| ||| ||||| || || || ||||| | || |||||| | | Sbjct 865896 GGGTGCCGGCGTTAAAGAGAGTGGGTGAAGCATGAGTGAAGAATTTGGACGACATTAGAT 865955 Query 139853 CGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCA 139912 |||||| || || | | | ||| || || |||||||| | ||| ||||| | Sbjct 865956 TGTACGTCTCAATCACACGCTCAACGTCATCGCCCCAAATACCGACGGCGACACGCATAA 866015 Query 139913 GCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTC 139970 ||| || || || ||| | | | || |||| ||| || || ||||| || Sbjct 866016 TCATGTGCTGAGGTCGCTCGACAATCTTCCCATCGAGTTTCAGGAGGTACGACCGT--TC 866073 Query 139971 TAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||||||||| |||| ||||| || |||||||| Sbjct 866074 GAGGGTCTTGAAGCCGAAGTATTGGTAATTGAAATC 866109 >seq24 Length=1627699 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || ||||| |||||||| ||| | | Sbjct 1128529 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACGATTACCCTCGAAGTTGAATCATCG 1128588 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || ||||||||||| Sbjct 1128589 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGCATCCCTCCCGATCAG 1128648 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | |||||||| || || |||||||| ||| | | | | || ||||| ||| Sbjct 1128649 CAACGTCTTATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTTTCTGATTACAAC 1128708 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 1128709 ATTCAGAAGGAGTCCACCCTTCAC 1128732 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || |||||||||||||| || | || Sbjct 1128757 ATGCAGATCTTTGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAAGTTGAGTCTTCC 1128816 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || ||||| || |||||||| Sbjct 1128817 GATACCATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGAATTCCCCCCGATCAG 1128876 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || |||||||| || ||||| ||||| | | | || ||||| || Sbjct 1128877 CAGCGTCTCATTTTTGCCGGCAAGCAGCTTGAGGACGGTCGCACTCTTTCTGATTACAAT 1128936 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 1128937 ATCCAGAAGGAGTCCACGCTCCAC 1128960 >seq146 Length=3337086 Score = 86.0 bits (94), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| || || || || || || || || | ||||| | || | Sbjct 58586 AAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGATCGACAAT 58645 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||| || ||||| || ||||| |||||||||||||| ||| | || || Sbjct 58646 GTGAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTCTTATTTTC 58705 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 ||||| || ||||| |||||| | | | | || ||||| || ||||| |||| Sbjct 58706 GCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCTGATTACAATATTCAGAAGG 58760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896413395080