Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 165 1e-34
seq190 143 4e-28
seq201 100 5e-15
>seq2
Length=1899565
Score = 165 bits (182), Expect = 1e-34
Identities = 306/446 (69%), Gaps = 16/446 (4%)
Strand=Plus/Plus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062
|| |||||||||||| || || | | | || ||| || | |||||||| || |||
Sbjct 485316 GAAGGCAACATGCCCCACGTCATCATCTCTGGAATGCCAGGTATCGGCAAGACGACAAGC 485375
Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC---GAGGCCGTGCTCGAA 2019119
||| || || ||||| || || || | |||| | |||||||| || |||
Sbjct 485376 ATCCACTGTCTCGCGCG---GCAATTACTCGGAGACGCCTATAAGGAGGCCGTACTAGAA 485432
Query 2019120 CTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCT 2019179
||||| || ||||| | ||| | ||||||||||| | |||||| |||
Sbjct 485433 CTCAACGCCAGCGACGAAAGAGGCATCGACGTCGTGCGCAACCGAATCAAGG-----GCT 485487
Query 2019180 TCG---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGG 2019234
||| ||||||| || ||| |||||||||||||||||| | |||||||||| || |
Sbjct 485488 TCGCCCAAAAGAAAGTCACCCTCCCGCCCGGCCGCCACAAGCTCGTCATCCTCGACGAAG 485547
Query 2019235 CCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCA 2019294
||||| || | || |||| || || ||||||||||| |||||||||| ||| |||
Sbjct 485548 CCGACAGCATGACTTCGGGCGCGCAACAGGCCCTCCGCCGAACCATGGAAATCTACTCCA 485607
Query 2019295 ACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGA 2019354
|||||||||| || || | || |||||| ||| | | | ||||| |||| ||
Sbjct 485608 ACACGACGCGATTCGCCTTCGCGTGCAACCAGTCTAACAAGATTATCGAGCCCCTGCAAT 485667
Query 2019355 GCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGC 2019414
||| ||||| || | |||| |||| | || ||||| ||| | | | | |||
Sbjct 485668 CCCGCTGCGCTATTCTTCGCTACTCGCGGTTAACGGACGCGCAGGTAGTGAAGAGGCTGA 485727
Query 2019415 GCGAGATTATCGACGCCGAAAAGGTC 2019440
|||| ||||| || |||||||||
Sbjct 485728 TGCAGATCATCGAGGCGGAAAAGGTC 485753
>seq190
Length=2042575
Score = 143 bits (158), Expect = 4e-28
Identities = 195/270 (72%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932
|||||| || || | ||||||| ||||| || || || || ||| |||||| |
Sbjct 1615937 TCCTCTTAGTGCTGGCCATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGA 1615878
Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992
||||||||||||| |||| ||||| |||||| | ||| ||||||| | | ||
Sbjct 1615877 AGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGT 1615818
Query 793993 AGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050
|| |||||| ||||| ||||| ||||| | |||||||||||| |||||||||||
Sbjct 1615817 AGATCTTCTCATTTCCGAGGGCGACG--AGCAGCCTGTCGGCGACGAACTCAATGTACTG 1615760
Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTC 794110
||||||| ||||||||||||| || || ||| || | ||| ||| |||||
Sbjct 1615759 CTTCATGAGGTTCGCGTTCATGCCGAGCAGGGCACAGGGGAGGGCCTCAGTGAGGAACTC 1615700
Query 794111 TTTCTCGATCTCGACGGCCTCGATGATGAT 794140
| |||||||| |||||| || | |||||
Sbjct 1615699 CTGCTCGATCTTGACGGCATCAGTAATGAT 1615670
Score = 98.7 bits (108), Expect = 2e-14
Identities = 96/121 (79%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606
|| || |||||| |||||||| || || || | | || ||||||| |||||| || ||
Sbjct 1615317 GTCTCAATGGCGTTGAAGAGGTGAGTTCT-CTGGGCGGGCTCCTTGATGTAGGTATCAAT 1615259
Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
|||||| ||||||||||| ||||||||||| || || ||||||||| || || |||||
Sbjct 1615258 GAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 1615199
Query 794667 G 794667
|
Sbjct 1615198 G 1615198
>seq201
Length=1935873
Score = 100 bits (110), Expect = 5e-15
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| | ||||| || |||||||||||||| || || | || |||||||| || ||||||
Sbjct 1505074 GCCTCGAACTATCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 1505133
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||| ||||| ||||| || ||||||||||| || || || | | |||
Sbjct 1505134 ATGATCAAGGGGAAGTCCCCCGACGAGATCCGCAAGACTTTCAATATTACGAACG 1505188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916223954967629
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |