Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 165 1e-34 seq190 143 4e-28 seq201 100 5e-15 >seq2 Length=1899565 Score = 165 bits (182), Expect = 1e-34 Identities = 306/446 (69%), Gaps = 16/446 (4%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || |||||||||||| || || | | | || ||| || | |||||||| || ||| Sbjct 485316 GAAGGCAACATGCCCCACGTCATCATCTCTGGAATGCCAGGTATCGGCAAGACGACAAGC 485375 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC---GAGGCCGTGCTCGAA 2019119 ||| || || ||||| || || || | |||| | |||||||| || ||| Sbjct 485376 ATCCACTGTCTCGCGCG---GCAATTACTCGGAGACGCCTATAAGGAGGCCGTACTAGAA 485432 Query 2019120 CTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCT 2019179 ||||| || ||||| | ||| | ||||||||||| | |||||| ||| Sbjct 485433 CTCAACGCCAGCGACGAAAGAGGCATCGACGTCGTGCGCAACCGAATCAAGG-----GCT 485487 Query 2019180 TCG---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGG 2019234 ||| ||||||| || ||| |||||||||||||||||| | |||||||||| || | Sbjct 485488 TCGCCCAAAAGAAAGTCACCCTCCCGCCCGGCCGCCACAAGCTCGTCATCCTCGACGAAG 485547 Query 2019235 CCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCA 2019294 ||||| || | || |||| || || ||||||||||| |||||||||| ||| ||| Sbjct 485548 CCGACAGCATGACTTCGGGCGCGCAACAGGCCCTCCGCCGAACCATGGAAATCTACTCCA 485607 Query 2019295 ACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGA 2019354 |||||||||| || || | || |||||| ||| | | | ||||| |||| || Sbjct 485608 ACACGACGCGATTCGCCTTCGCGTGCAACCAGTCTAACAAGATTATCGAGCCCCTGCAAT 485667 Query 2019355 GCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGC 2019414 ||| ||||| || | |||| |||| | || ||||| ||| | | | | ||| Sbjct 485668 CCCGCTGCGCTATTCTTCGCTACTCGCGGTTAACGGACGCGCAGGTAGTGAAGAGGCTGA 485727 Query 2019415 GCGAGATTATCGACGCCGAAAAGGTC 2019440 |||| ||||| || ||||||||| Sbjct 485728 TGCAGATCATCGAGGCGGAAAAGGTC 485753 >seq190 Length=2042575 Score = 143 bits (158), Expect = 4e-28 Identities = 195/270 (72%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 793873 TCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAA 793932 |||||| || || | ||||||| ||||| || || || || ||| |||||| | Sbjct 1615937 TCCTCTTAGTGCTGGCCATGACGCCGGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGA 1615878 Query 793933 AGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGT 793992 ||||||||||||| |||| ||||| |||||| | ||| ||||||| | | || Sbjct 1615877 AGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACCTGT 1615818 Query 793993 AGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTG 794050 || |||||| ||||| ||||| ||||| | |||||||||||| ||||||||||| Sbjct 1615817 AGATCTTCTCATTTCCGAGGGCGACG--AGCAGCCTGTCGGCGACGAACTCAATGTACTG 1615760 Query 794051 GCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTC 794110 ||||||| ||||||||||||| || || ||| || | ||| ||| ||||| Sbjct 1615759 CTTCATGAGGTTCGCGTTCATGCCGAGCAGGGCACAGGGGAGGGCCTCAGTGAGGAACTC 1615700 Query 794111 TTTCTCGATCTCGACGGCCTCGATGATGAT 794140 | |||||||| |||||| || | ||||| Sbjct 1615699 CTGCTCGATCTTGACGGCATCAGTAATGAT 1615670 Score = 98.7 bits (108), Expect = 2e-14 Identities = 96/121 (79%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 794548 GTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGAT 794606 || || |||||| |||||||| || || || | | || ||||||| |||||| || || Sbjct 1615317 GTCTCAATGGCGTTGAAGAGGTGAGTTCT-CTGGGCGGGCTCCTTGATGTAGGTATCAAT 1615259 Query 794607 GAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||| ||||||||||| ||||||||||| || || ||||||||| || || ||||| Sbjct 1615258 GAGGAGGGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 1615199 Query 794667 G 794667 | Sbjct 1615198 G 1615198 >seq201 Length=1935873 Score = 100 bits (110), Expect = 5e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| | ||||| || |||||||||||||| || || | || |||||||| || |||||| Sbjct 1505074 GCCTCGAACTATCTTGACATCAAGCCCCTACTGGACGTCGGTTGCAAGACAGTCGCCAAC 1505133 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||| ||||| ||||| || ||||||||||| || || || | | ||| Sbjct 1505134 ATGATCAAGGGGAAGTCCCCCGACGAGATCCGCAAGACTTTCAATATTACGAACG 1505188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916223954967629