Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq46 125 7e-24
seq24 111 2e-19
seq146 98.7 1e-15
>seq46
Length=1231756
Score = 125 bits (138), Expect = 7e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| || ||||| || | ||| ||||||||||||||||||
Sbjct 616520 GGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 616579
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||| |||||||| |||||||| |||||||| |||||| |||
Sbjct 616580 GGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 616639
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||| | || ||| || || | ||||| ||| ||||| || || ||
Sbjct 616640 GACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGT 616699
Query 133643 TTTTACGAAAATCTGCATG 133661
|| ||||| || ||||||
Sbjct 616700 CTTGACGAAGATTTGCATG 616718
>seq24
Length=1627699
Score = 111 bits (122), Expect = 2e-19
Identities = 139/188 (74%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| |||||||| ||| | ||| | | | |||||||||||||||||
Sbjct 1128497 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 1128439
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | || || ||||| ||||| || || |||||||| |||||| |||
Sbjct 1128438 GGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT 1128379
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| | ||| || |||| ||||| ||| |||||||| || ||
Sbjct 1128378 AACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGT 1128319
Query 133643 TTTTACGA 133650
|| ||||
Sbjct 1128318 CTTGACGA 1128311
Score = 109 bits (120), Expect = 5e-19
Identities = 131/176 (74%), Gaps = 4/176 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520
|||||| || ||||| ||||||||||| | || || | |||||| ||||||||
Sbjct 1128188 GGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCC--GTCCTCAAGCTGCTTT 1128131
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| |||| || ||||| |||||||| |||||||| |||||||| |||||| |
Sbjct 1128130 CCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGAC 1128071
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|||| | || | || || | || ||| || |||| ||||| ||| ||||||||
Sbjct 1128070 TTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 1128015
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| ||||||||||| | ||| ||| |||||| |||||||||||
Sbjct 1128953 GTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACC-GTCCTCAAGCTGCTTGCC 1128895
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| ||||||| |||||||| ||||| || || || |||||||| ||||| |||
Sbjct 1128894 GGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTT 1128835
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || |||| | ||| || |||| || | || |||||||| || ||
Sbjct 1128834 CACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGTAAGGGT 1128775
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 1128774 CTTGACAAAGATCTGCAT 1128757
Score = 100 bits (110), Expect = 3e-16
Identities = 143/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || |||||||| | ||| | | | || || |||||||| |
Sbjct 1128726 GGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCA-TCTTCCAGCTGCTTTC 1128668
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || || ||||| |||||||||||||| ||||| || ||||| ||
Sbjct 1128667 CAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACT 1128608
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||| | | || || |||| ||| | || ||||| || ||||
Sbjct 1128607 TGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAG 1128548
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 1128547 TCTTCACGAAAATCTGCAT 1128529
>seq146
Length=3337086
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| ||||||||||| | ||| | | | |||||||||||||| || ||| ||||
Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTTCCGGCGAAAAT 58700
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| ||||| || ||||||||||| || |||||||| ||||| ||| | | ||
Sbjct 58699 AAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTC 58640
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| |||||| | || ||| || || | ||||| ||| || || || || || || |||||
Sbjct 58639 GATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580
Query 133652 A 133652
|
Sbjct 58579 A 58579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419524977640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |