Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq46 125 7e-24 seq24 111 2e-19 seq146 98.7 1e-15 >seq46 Length=1231756 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| || | ||| |||||||||||||||||| Sbjct 616520 GGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 616579 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| |||||||| |||||||| |||||||| |||||| ||| Sbjct 616580 GGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT 616639 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || || | ||||| ||| ||||| || || || Sbjct 616640 GACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGT 616699 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| || |||||| Sbjct 616700 CTTGACGAAGATTTGCATG 616718 >seq24 Length=1627699 Score = 111 bits (122), Expect = 2e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| |||||||| ||| | ||| | | | ||||||||||||||||| Sbjct 1128497 GTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 1128439 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | || || ||||| ||||| || || |||||||| |||||| ||| Sbjct 1128438 GGCGAAAATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT 1128379 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || |||| ||||| ||| |||||||| || || Sbjct 1128378 AACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGT 1128319 Query 133643 TTTTACGA 133650 || |||| Sbjct 1128318 CTTGACGA 1128311 Score = 109 bits (120), Expect = 5e-19 Identities = 131/176 (74%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 |||||| || ||||| ||||||||||| | || || | |||||| |||||||| Sbjct 1128188 GGTGGATTCCTTCTGAATATTGTAATCAGAAAGGGTTCGGCC--GTCCTCAAGCTGCTTT 1128131 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| |||| || ||||| |||||||| |||||||| |||||||| |||||| | Sbjct 1128130 CCAGCGAAAATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGAC 1128071 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 |||| | || | || || | || ||| || |||| ||||| ||| |||||||| Sbjct 1128070 TTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 1128015 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| ||||||||||| | ||| ||| |||||| ||||||||||| Sbjct 1128953 GTGGACTCCTTCTGGATATTGTAATCAGAAAGAGTGCGACC-GTCCTCAAGCTGCTTGCC 1128895 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || ||||||| |||||||| ||||| || || || |||||||| ||||| ||| Sbjct 1128894 GGCAAAAATGAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGAATCTTCGACTT 1128835 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || |||| | ||| || |||| || | || |||||||| || || Sbjct 1128834 CACATTGTCGATGGTATCGGAAGACTCAACTTCGAGCGTAATCGTCTTGCCGGTAAGGGT 1128775 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 1128774 CTTGACAAAGATCTGCAT 1128757 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || |||||||| | ||| | | | || || |||||||| | Sbjct 1128726 GGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCA-TCTTCCAGCTGCTTTC 1128668 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || || ||||| |||||||||||||| ||||| || ||||| || Sbjct 1128667 CAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCCTCCTTATCCTGAATCTTGGACT 1128608 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | || || |||| ||| | || ||||| || |||| Sbjct 1128607 TGACGTTGTCGATGGTGTCCGATGATTCAACTTCGAGGGTAATCGTCTTGCCAGTAAGAG 1128548 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 1128547 TCTTCACGAAAATCTGCAT 1128529 >seq146 Length=3337086 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| ||||||||||| | ||| | | | |||||||||||||| || ||| |||| Sbjct 58758 TTCTGAATATTGTAATCAGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTTCCGGCGAAAAT 58700 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||| || ||||||||||| || |||||||| ||||| ||| | | || Sbjct 58699 AAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTC 58640 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | || ||| || || | ||||| ||| || || || || || || ||||| Sbjct 58639 GATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAA 58580 Query 133652 A 133652 | Sbjct 58579 A 58579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419524977640