Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 150 3e-30 seq190 149 9e-30 seq68 111 2e-18 seq135 95.1 2e-13 >seq2 Length=1899565 Score = 150 bits (166), Expect = 3e-30 Identities = 304/451 (67%), Gaps = 0/451 (0%) Strand=Plus/Minus Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933 |||| || || || || ||| ||||||| |||||| | | | ||| |||||| | Sbjct 485688 AGCGAAGAATAGCGCAGCGGGATTGCAGGGGCTCGATAATCTTGTTAGACTGGTTGCACG 485629 Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993 | | ||| || |||||||| |||| | |||||||||| |||||||||||||| | Sbjct 485628 CGAAGGCGAATCGCGTCGTGTTGGAGTAGATTTCCATGGTTCGGCGGAGGGCCTGTTGCG 485569 Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCA 333053 | ||| || | || |||||| ||||||||||||| || ||||||||| ||| |||| | Sbjct 485568 CGCCCGAAGTCATGCTGTCGGCTTCGTCGAGGATGACGAGCTTGTGGCGGCCGGGCGGGA 485509 Query 333054 GATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCT 333113 | || | || |||| | ||||| |||||||||||||| | ||| | | Sbjct 485508 GGGTGACTTTCTTTTGGGCGAAGCCCTTGATTCGGTTGCGCACGACGTCGATGCCTCTTT 485449 Query 333114 CGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCG 333173 |||| ||||||||||| || |||||||| | ||| | || | | |||| Sbjct 485448 CGTCGCTGGCGTTGAGTTCTAGTACGGCCTCCTTATAGGCGTCTCCGAGTAATTGCCGCG 485389 Query 333174 CCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGG 333233 | || || |||||| || |||||||| | || ||| || | | | || || || Sbjct 485388 CGAGACAGTGGATGCTTGTCGTCTTGCCGATACCTGGCATTCCAGAGATGATGACGTGGG 485329 Query 333234 GCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAA 333293 |||||||||| || || | |||||| | | | | ||||||||||| Sbjct 485328 GCATGTTGCCTTCTCGAGCGATGATTTTGAGGCGTTCTATCGTTTCTGTGTTGCCGACAA 485269 Query 333294 TGTCGTCGAGCACCATTGGGCGGTACTTTTC 333324 |||||||| | || || | ||||||||| Sbjct 485268 CATCGTCGAGGAAGATGGGTCTGTACTTTTC 485238 >seq190 Length=2042575 Score = 149 bits (164), Expect = 9e-30 Identities = 241/340 (71%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||||||||| || ||||| ||||| ||| | || | Sbjct 1614985 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATC 1615043 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| | || |||||| ||||| Sbjct 1615044 TCTCCAAGGATCTCCACG----ACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTC 1615099 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||| | || ||||| || ||||||| |||||| ||||| ||||||||| | Sbjct 1615100 ATCTCGCACATTCTTGCCTTCTT-CGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGT 1615158 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||||| | || ||||| || | || ||||| |||||||| Sbjct 1615159 TGAGCGATTCAGCGCTGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGAT 1615218 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| ||||| || || |||||| ||||||| Sbjct 1615219 CATGATGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATTGATACCTACATCAAGGA 1615278 Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACAC 1456106 || | | || || || |||||||| |||||| || || Sbjct 1615279 GCCCGCCCAG-AGAACTCACCTCTTCAACGCCATTGAGAC 1615317 Score = 132 bits (146), Expect = 7e-25 Identities = 192/266 (72%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 1456516 CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575 |||| | ||||| || |||||| |||||||| | ||||| ||| ||| | || || Sbjct 1615663 CAAGGACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCC 1615722 Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635 || || ||||||||||||| | | |||||| ||||||||||| || |||||| Sbjct 1615723 CTGTGCCCTGCTCGGCATGAACGCGAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCC 1615780 Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 ||| | ||||||| || ||||| | ||||| |||| || | ||||||| ||| Sbjct 1615781 GACAGGCTGCTCGTCGCCCTCGGAAATG-AGAAGATCTACAGGTCCACCAACCCCTTCGA 1615839 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754 | |||||| ||||| |||| |||||||||||||| |||||| || | ||| || Sbjct 1615840 CTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 1615899 Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780 ||| ||||||||||||| |||| Sbjct 1615900 CTACCAGAAGGCCGGCGTCATGGCCA 1615925 >seq68 Length=974473 Score = 111 bits (122), Expect = 2e-18 Identities = 181/259 (70%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| |||||||| |||||||| || | | ||| || || ||||| || | ||| Sbjct 865920 CCCACTCTCTTTAACGCCGGCACCCCTCAAGCCCAGCTGTCTTCATGCTTCCTCGTCGAC 865861 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| || ||||||||| | ||| ||||| | ||||| Sbjct 865860 ATGAAGGATGATAGTATTGAGGGAATTTATGACACGTTGAAGACATGCGCAATGATCTCA 865801 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGG--TGCGCGCCGCGGGCGCCTACG 260102 || |||||| |||||||| | | || || | | ||||| | ||| | || Sbjct 865800 AAAATGGCCGGTGGCATCGGCCT--CAACATCCATCGCATTCGCGCTACAGGCTCATATA 865743 Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162 | ||||| || || || ||||||||| || | ||||||||||| || || ||| ||| Sbjct 865742 TTGCGGGGACAAATGGAACATCCAACGGCATTATTCCCATGCTTCGTGTCTTCAACAACA 865683 Query 260163 CGGCGCGCTACGTCGACCA 260181 | || | ||||| ||||| Sbjct 865682 CCGCCAGGTACGTTGACCA 865664 >seq135 Length=3471471 Score = 95.1 bits (104), Expect = 2e-13 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 |||||||||||| ||||||| |||||| |||||| || |||||| ||||| ||| Sbjct 938934 CTCCATCTCTCCGAGGCGGAGGCCGCCGTCGCGCGAACGACCCTCGGTGGGCTGGCGGGT 938875 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 | || | |||||| || | ||||| ||| |||||||| | ||| ||| || Sbjct 938874 TAAGATGGCGCGGGGGCCTCGGGCTCGGGAGTGCATCTTGTCTTGGACCATGTGCTTGAG 938815 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGCCGGTG 1600432 | ||||||||||| || ||||| ||||| | || || | ||||||||||||| Sbjct 938814 GCGCTGGTAGTAGATGGG-GCCGTTGAAGATGTAGGCTTCGAGGGGCTCGCCGGTG 938760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177790848662182