Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 3e-30
seq190 149 9e-30
seq68 111 2e-18
seq135 95.1 2e-13
>seq2
Length=1899565
Score = 150 bits (166), Expect = 3e-30
Identities = 304/451 (67%), Gaps = 0/451 (0%)
Strand=Plus/Minus
Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933
|||| || || || || ||| ||||||| |||||| | | | ||| |||||| |
Sbjct 485688 AGCGAAGAATAGCGCAGCGGGATTGCAGGGGCTCGATAATCTTGTTAGACTGGTTGCACG 485629
Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993
| | ||| || |||||||| |||| | |||||||||| |||||||||||||| |
Sbjct 485628 CGAAGGCGAATCGCGTCGTGTTGGAGTAGATTTCCATGGTTCGGCGGAGGGCCTGTTGCG 485569
Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCA 333053
| ||| || | || |||||| ||||||||||||| || ||||||||| ||| |||| |
Sbjct 485568 CGCCCGAAGTCATGCTGTCGGCTTCGTCGAGGATGACGAGCTTGTGGCGGCCGGGCGGGA 485509
Query 333054 GATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCT 333113
| || | || |||| | ||||| |||||||||||||| | ||| | |
Sbjct 485508 GGGTGACTTTCTTTTGGGCGAAGCCCTTGATTCGGTTGCGCACGACGTCGATGCCTCTTT 485449
Query 333114 CGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCG 333173
|||| ||||||||||| || |||||||| | ||| | || | | ||||
Sbjct 485448 CGTCGCTGGCGTTGAGTTCTAGTACGGCCTCCTTATAGGCGTCTCCGAGTAATTGCCGCG 485389
Query 333174 CCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGG 333233
| || || |||||| || |||||||| | || ||| || | | | || || ||
Sbjct 485388 CGAGACAGTGGATGCTTGTCGTCTTGCCGATACCTGGCATTCCAGAGATGATGACGTGGG 485329
Query 333234 GCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAA 333293
|||||||||| || || | |||||| | | | | |||||||||||
Sbjct 485328 GCATGTTGCCTTCTCGAGCGATGATTTTGAGGCGTTCTATCGTTTCTGTGTTGCCGACAA 485269
Query 333294 TGTCGTCGAGCACCATTGGGCGGTACTTTTC 333324
|||||||| | || || | |||||||||
Sbjct 485268 CATCGTCGAGGAAGATGGGTCTGTACTTTTC 485238
>seq190
Length=2042575
Score = 149 bits (164), Expect = 9e-30
Identities = 241/340 (71%), Gaps = 15/340 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||||||||| || ||||| ||||| ||| | || |
Sbjct 1614985 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATC 1615043
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887
|| | || |||| ||||| ||| | || |||||| |||||
Sbjct 1615044 TCTCCAAGGATCTCCACG----ACTGGAACAACAAGCTCAATGATGACGAGAAGTATTTC 1615099
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||| | || ||||| || ||||||| |||||| ||||| ||||||||| |
Sbjct 1615100 ATCTCGCACATTCTTGCCTTCTT-CGCCGCCTCCGATGGTATCGTCAACGAGAACCTCGT 1615158
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| || || | |||||||| | || ||||| || | || ||||| ||||||||
Sbjct 1615159 TGAGCGATTCAGCGCTGAGGTCCAGATCCCTGAGGCCCGCTGCTTCTACGGTTTCCAGAT 1615218
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || |||||||| ||||| || || |||||| |||||||
Sbjct 1615219 CATGATGGAGAACATCCACTCGGAGACCTACTCCCTCCTCATTGATACCTACATCAAGGA 1615278
Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACAC 1456106
|| | | || || || |||||||| |||||| || ||
Sbjct 1615279 GCCCGCCCAG-AGAACTCACCTCTTCAACGCCATTGAGAC 1615317
Score = 132 bits (146), Expect = 7e-25
Identities = 192/266 (72%), Gaps = 4/266 (2%)
Strand=Plus/Plus
Query 1456516 CAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCC 1456575
|||| | ||||| || |||||| |||||||| | ||||| ||| ||| | || ||
Sbjct 1615663 CAAGGACATCATTACTGATGCCGTCAAGATCGAGCAGGAGTTCCTCACTGAGGCCCTCCC 1615722
Query 1456576 GGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCC 1456635
|| || ||||||||||||| | | |||||| ||||||||||| || ||||||
Sbjct 1615723 CTGTGCCCTGCTCGGCATGAACGCGAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCC 1615780
Query 1456636 GACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
||| | ||||||| || ||||| | ||||| |||| || | ||||||| |||
Sbjct 1615781 GACAGGCTGCTCGTCGCCCTCGGAAATG-AGAAGATCTACAGGTCCACCAACCCCTTCGA 1615839
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGA 1456754
| |||||| ||||| |||| |||||||||||||| |||||| || | ||| ||
Sbjct 1615840 CTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 1615899
Query 1456755 GTACGCCAAGGCCGGCGTCACCGCCA 1456780
||| ||||||||||||| ||||
Sbjct 1615900 CTACCAGAAGGCCGGCGTCATGGCCA 1615925
>seq68
Length=974473
Score = 111 bits (122), Expect = 2e-18
Identities = 181/259 (70%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
||||| |||||||| |||||||| || | | ||| || || ||||| || | |||
Sbjct 865920 CCCACTCTCTTTAACGCCGGCACCCCTCAAGCCCAGCTGTCTTCATGCTTCCTCGTCGAC 865861
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| || ||||||||| | ||| ||||| | |||||
Sbjct 865860 ATGAAGGATGATAGTATTGAGGGAATTTATGACACGTTGAAGACATGCGCAATGATCTCA 865801
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGG--TGCGCGCCGCGGGCGCCTACG 260102
|| |||||| |||||||| | | || || | | ||||| | ||| | ||
Sbjct 865800 AAAATGGCCGGTGGCATCGGCCT--CAACATCCATCGCATTCGCGCTACAGGCTCATATA 865743
Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162
| ||||| || || || ||||||||| || | ||||||||||| || || ||| |||
Sbjct 865742 TTGCGGGGACAAATGGAACATCCAACGGCATTATTCCCATGCTTCGTGTCTTCAACAACA 865683
Query 260163 CGGCGCGCTACGTCGACCA 260181
| || | ||||| |||||
Sbjct 865682 CCGCCAGGTACGTTGACCA 865664
>seq135
Length=3471471
Score = 95.1 bits (104), Expect = 2e-13
Identities = 128/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
|||||||||||| ||||||| |||||| |||||| || |||||| ||||| |||
Sbjct 938934 CTCCATCTCTCCGAGGCGGAGGCCGCCGTCGCGCGAACGACCCTCGGTGGGCTGGCGGGT 938875
Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377
| || | |||||| || | ||||| ||| |||||||| | ||| ||| ||
Sbjct 938874 TAAGATGGCGCGGGGGCCTCGGGCTCGGGAGTGCATCTTGTCTTGGACCATGTGCTTGAG 938815
Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGCCGGTG 1600432
| ||||||||||| || ||||| ||||| | || || | |||||||||||||
Sbjct 938814 GCGCTGGTAGTAGATGGG-GCCGTTGAAGATGTAGGCTTCGAGGGGCTCGCCGGTG 938760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177790848662182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |